Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   AUL54_RS21705 Genome accession   NZ_CP013950
Coordinates   1899117..1899281 (-) Length   54 a.a.
NCBI ID   WP_269465405.1    Uniprot ID   -
Organism   Bacillus sp. SDLI1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1894117..1904281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AUL54_RS21705 comS 1899117..1899281 (-) 165 WP_269465405.1 competence protein ComS Regulator
  AUL54_RS21710 srfAB 1899346..1902390 (-) 3045 Protein_1831 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6153.16 Da        Isoelectric Point: 12.0559

>NTDB_id=166514 AUL54_RS21705 WP_269465405.1 1899117..1899281(-) (comS) [Bacillus sp. SDLI1]
MRARRSSSLNRSGKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=166514 AUL54_RS21705 WP_269465405.1 1899117..1899281(-) (comS) [Bacillus sp. SDLI1]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGGCAAGCGCCTCATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

60.87

85.185

0.519

Multiple sequence alignment