Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   AUL54_RS18330 Genome accession   NZ_CP013950
Coordinates   3728364..3728741 (+) Length   125 a.a.
NCBI ID   WP_060964768.1    Uniprot ID   A0AAI8N008
Organism   Bacillus sp. SDLI1     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3723364..3733741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AUL54_RS18295 (AUL54_18305) - 3723679..3724629 (+) 951 WP_060964763.1 magnesium transporter CorA family protein -
  AUL54_RS18300 (AUL54_18310) comGA 3724822..3725892 (+) 1071 WP_045926720.1 competence type IV pilus ATPase ComGA Machinery gene
  AUL54_RS18305 (AUL54_18315) comGB 3725879..3726916 (+) 1038 WP_060964764.1 competence type IV pilus assembly protein ComGB Machinery gene
  AUL54_RS18310 (AUL54_18320) comGC 3726963..3727229 (+) 267 WP_045926801.1 competence type IV pilus major pilin ComGC Machinery gene
  AUL54_RS18315 (AUL54_18325) comGD 3727219..3727656 (+) 438 WP_060964765.1 competence type IV pilus minor pilin ComGD Machinery gene
  AUL54_RS18320 (AUL54_18330) comGE 3727640..3727954 (+) 315 WP_060964766.1 competence type IV pilus minor pilin ComGE Machinery gene
  AUL54_RS18325 (AUL54_18335) comGF 3727866..3728363 (+) 498 WP_235588382.1 competence type IV pilus minor pilin ComGF -
  AUL54_RS18330 (AUL54_18340) comGG 3728364..3728741 (+) 378 WP_060964768.1 competence type IV pilus minor pilin ComGG Machinery gene
  AUL54_RS18335 (AUL54_18345) - 3728798..3728977 (+) 180 WP_022552966.1 YqzE family protein -
  AUL54_RS18340 (AUL54_18350) - 3729018..3729347 (-) 330 WP_016938972.1 DUF3889 domain-containing protein -
  AUL54_RS18345 (AUL54_18355) tapA 3729606..3730277 (+) 672 WP_060964769.1 amyloid fiber anchoring/assembly protein TapA -
  AUL54_RS18350 (AUL54_18360) - 3730249..3730833 (+) 585 WP_060964770.1 signal peptidase I -
  AUL54_RS18355 (AUL54_18365) - 3730897..3731682 (+) 786 WP_016938976.1 TasA family protein -
  AUL54_RS18360 (AUL54_18370) sinR 3731730..3732065 (-) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  AUL54_RS18365 (AUL54_18375) sinI 3732099..3732272 (-) 174 WP_016938977.1 anti-repressor SinI family protein Regulator
  AUL54_RS18370 (AUL54_18380) - 3732449..3733243 (-) 795 WP_060964771.1 YqhG family protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14102.09 Da        Isoelectric Point: 10.1260

>NTDB_id=166508 AUL54_RS18330 WP_060964768.1 3728364..3728741(+) (comGG) [Bacillus sp. SDLI1]
MYKSDGFIYPAVLFVSAAVLLVISYTSSDFITRKTFAKEAGEYWIGENLLQNGALLSSRHVIQGQKGRTGTHRFPYGTVS
FQITESGKRETVQVTIQAETASGTRREVHLLFNQKKKQLIQWTEV

Nucleotide


Download         Length: 378 bp        

>NTDB_id=166508 AUL54_RS18330 WP_060964768.1 3728364..3728741(+) (comGG) [Bacillus sp. SDLI1]
ATGTACAAATCTGACGGGTTTATATATCCTGCGGTTCTGTTTGTTTCTGCCGCGGTTTTACTTGTCATCAGCTATACTTC
ATCTGATTTCATCACCCGAAAAACCTTTGCAAAAGAGGCCGGGGAGTACTGGATCGGTGAGAACCTGCTTCAAAACGGCG
CGCTGCTGTCAAGCCGTCATGTGATACAGGGACAAAAGGGCCGAACCGGTACACATCGTTTTCCATACGGAACCGTTTCC
TTTCAGATCACCGAAAGCGGTAAGCGGGAAACGGTTCAGGTTACAATTCAGGCGGAAACAGCGTCAGGGACGAGACGGGA
GGTTCACCTTTTGTTCAATCAGAAGAAGAAACAGCTGATTCAATGGACAGAAGTATAA

Domains

Predicted by InterproScan.

ComG operon protein 7 (ComGG)

(30-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Bacillus subtilis subsp. subtilis str. 168

50

99.2

0.496

Multiple sequence alignment