Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | AUL54_RS10180 | Genome accession | NZ_CP013950 |
| Coordinates | 2138369..2140804 (-) | Length | 811 a.a. |
| NCBI ID | WP_060963753.1 | Uniprot ID | A0AAI8HS63 |
| Organism | Bacillus sp. SDLI1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2133369..2145804
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUL54_RS10155 (AUL54_10160) | ispF | 2133415..2133891 (-) | 477 | WP_016935912.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| AUL54_RS10160 (AUL54_10165) | ispD | 2133884..2134582 (-) | 699 | WP_060965083.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| AUL54_RS10165 (AUL54_10170) | - | 2134596..2135696 (-) | 1101 | WP_016935914.1 | PIN/TRAM domain-containing protein | - |
| AUL54_RS10170 (AUL54_10175) | disA | 2135810..2136892 (-) | 1083 | WP_003156401.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| AUL54_RS10175 (AUL54_10180) | radA | 2136896..2138275 (-) | 1380 | WP_060963752.1 | DNA repair protein RadA | Machinery gene |
| AUL54_RS10180 (AUL54_10185) | clpC | 2138369..2140804 (-) | 2436 | WP_060963753.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| AUL54_RS10185 (AUL54_10190) | - | 2140801..2141892 (-) | 1092 | WP_060963754.1 | protein arginine kinase | - |
| AUL54_RS10190 (AUL54_10195) | - | 2141892..2142449 (-) | 558 | WP_016935918.1 | UvrB/UvrC motif-containing protein | - |
| AUL54_RS10195 (AUL54_10200) | ctsR | 2142463..2142927 (-) | 465 | WP_016935919.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90192.63 Da Isoelectric Point: 5.7558
>NTDB_id=166473 AUL54_RS10180 WP_060963753.1 2138369..2140804(-) (clpC) [Bacillus sp. SDLI1]
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGTSGAGTNSSAN
TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTDVAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGTSGAGTNSSAN
TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTDVAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTN
Nucleotide
Download Length: 2436 bp
>NTDB_id=166473 AUL54_RS10180 WP_060963753.1 2138369..2140804(-) (clpC) [Bacillus sp. SDLI1]
ATGATGTTTGGAAGATTTACAGAGCGGGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATATTATTGGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCTTTAGAAGCGCTTG
GCCTCAATTCAGATAAAATGCAGAAAGAAGTGGAAAGTTTGATTGGCCGAGGACAGGAAAGCACCACCTCTGTCCCTCAT
TACACGCCTCGAGCCAAAAAGGTAATAGAACTATCAATGGATGAAGCCAGAAAGCTCGGTCATTCTTATGTAGGAACAGA
GCACATACTTCTTGGGCTGATTCGTGAAGGTGAGGGAGTCGCCGCGAGAGTTCTGAATAATCTGGGTGTCAGTCTCAATA
AGGCGAGACAGCAGGTTCTGCAGCTTCTCGGAAGCAATGAGACAGGGACATCCGGAGCAGGGACAAATAGCAGCGCAAAC
ACGCCGACGCTTGACAGTCTGGCGCGTGATTTAACCGCGATTGCGAGGGAAGACAGCCTTGATCCGGTTATCGGCCGAAG
CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACAAAGAATAATCCCGTTCTGATTGGGGAACCGGGTGTAG
GTAAAACTGCGATTGCTGAAGGTCTCGCACAGCAGATCATCAACAATGAAGTGCCGGAAATTTTACGCGATAAACGCGTA
ATGACATTAGACATGGGAACGGTTGTAGCCGGCACGAAATACCGCGGAGAATTTGAAGACCGTTTGAAAAAAGTAATGGA
TGAAATACGTCAGGCGGGCAATATCATTTTATTCATTGACGAATTGCACACACTGATCGGAGCTGGAGGAGCAGAAGGTG
CGATTGACGCGTCGAATATTTTAAAACCTTCACTCGCTCGCGGAGAGCTTCAGTGCATTGGTGCGACAACGCTTGATGAA
TACCGCAAATATATCGAAAAAGACGCAGCTCTGGAGCGCCGCTTCCAGCCGATTCAGGTGGATGAGCCGTCAGTCGATGA
AAGCATTCAGATCTTAAAAGGGCTTCGTGACCGCTATGAAGCGCATCACCGCGTATCCATTACCGATGAAGCGATCGAAG
CGGCGGTTAAATTGTCTGACCGTTATATTTCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGACGAAGCTGGT
TCAAAAGTACGTCTCCGTTCCTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAACTCGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAAAGCCAGGAGTTTGAAAAAGCGGCTTCTCTTCGTGATACGGAGCAGCGCTTGAGAGAACAGG
TGGAAGATACGAAAAAAACGTGGAAAGAAAAACAAGGCCAGGAGAACTCCGAAGTTTCTGTAGAGGATATCGCAATGGTG
GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCGCAAACGGAAACAGATAAGCTTCTCAATATGGAAAGTATTCT
GCACTCCCGCGTCATTGGCCAGGATGAAGCCGTTGTAGCCGTTGCGAAGGCTGTCAGACGTGCAAGAGCCGGTTTGAAGG
ATCCGAAACGTCCGATCGGTTCATTCATCTTCTTAGGCCCTACAGGCGTAGGGAAGACAGAGCTGGCAAGAGCGCTGGCG
GAATCTATTTTCGGTGATGAAGAAGCGATGATCAGAGTGGATATGTCCGAATATATGGAGAAACATTCGACTTCACGTCT
TGTCGGTTCTCCTCCGGGATATGTCGGCTATGATGAAGGCGGCCAGCTGACGGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTACTGCTTGATGAAATTGAAAAAGCGCATCCTGATGTGTTTAACATTCTTCTGCAAGTGCTTGAAGACGGACGCTTG
ACTGATTCAAAGGGACGCACTGTTGATTTCCGCAATACGATCCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTGGGCTTCAATGTGCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTCATGGGAGAGC
TGAAGCGTGCCTTCAGACCTGAATTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT
ACAGACATCGTGTCGCTTATGTCTGACCAATTAACAAAACGTCTGAAAGAACAAGATCTCTCTATAGAGCTGACGGATGT
TGCAAAAGCAAAAGTAGCAGACGAGGGCGTCGACTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGACCGGTTATCAGAAGAGCTTCTCAGAGGCAATATTGATAAAGGCCAGCACATCGTTCTTGACGTTGAAGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGAACTAA
ATGATGTTTGGAAGATTTACAGAGCGGGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATATTATTGGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCTTTAGAAGCGCTTG
GCCTCAATTCAGATAAAATGCAGAAAGAAGTGGAAAGTTTGATTGGCCGAGGACAGGAAAGCACCACCTCTGTCCCTCAT
TACACGCCTCGAGCCAAAAAGGTAATAGAACTATCAATGGATGAAGCCAGAAAGCTCGGTCATTCTTATGTAGGAACAGA
GCACATACTTCTTGGGCTGATTCGTGAAGGTGAGGGAGTCGCCGCGAGAGTTCTGAATAATCTGGGTGTCAGTCTCAATA
AGGCGAGACAGCAGGTTCTGCAGCTTCTCGGAAGCAATGAGACAGGGACATCCGGAGCAGGGACAAATAGCAGCGCAAAC
ACGCCGACGCTTGACAGTCTGGCGCGTGATTTAACCGCGATTGCGAGGGAAGACAGCCTTGATCCGGTTATCGGCCGAAG
CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACAAAGAATAATCCCGTTCTGATTGGGGAACCGGGTGTAG
GTAAAACTGCGATTGCTGAAGGTCTCGCACAGCAGATCATCAACAATGAAGTGCCGGAAATTTTACGCGATAAACGCGTA
ATGACATTAGACATGGGAACGGTTGTAGCCGGCACGAAATACCGCGGAGAATTTGAAGACCGTTTGAAAAAAGTAATGGA
TGAAATACGTCAGGCGGGCAATATCATTTTATTCATTGACGAATTGCACACACTGATCGGAGCTGGAGGAGCAGAAGGTG
CGATTGACGCGTCGAATATTTTAAAACCTTCACTCGCTCGCGGAGAGCTTCAGTGCATTGGTGCGACAACGCTTGATGAA
TACCGCAAATATATCGAAAAAGACGCAGCTCTGGAGCGCCGCTTCCAGCCGATTCAGGTGGATGAGCCGTCAGTCGATGA
AAGCATTCAGATCTTAAAAGGGCTTCGTGACCGCTATGAAGCGCATCACCGCGTATCCATTACCGATGAAGCGATCGAAG
CGGCGGTTAAATTGTCTGACCGTTATATTTCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGACGAAGCTGGT
TCAAAAGTACGTCTCCGTTCCTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAACTCGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAAAGCCAGGAGTTTGAAAAAGCGGCTTCTCTTCGTGATACGGAGCAGCGCTTGAGAGAACAGG
TGGAAGATACGAAAAAAACGTGGAAAGAAAAACAAGGCCAGGAGAACTCCGAAGTTTCTGTAGAGGATATCGCAATGGTG
GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCGCAAACGGAAACAGATAAGCTTCTCAATATGGAAAGTATTCT
GCACTCCCGCGTCATTGGCCAGGATGAAGCCGTTGTAGCCGTTGCGAAGGCTGTCAGACGTGCAAGAGCCGGTTTGAAGG
ATCCGAAACGTCCGATCGGTTCATTCATCTTCTTAGGCCCTACAGGCGTAGGGAAGACAGAGCTGGCAAGAGCGCTGGCG
GAATCTATTTTCGGTGATGAAGAAGCGATGATCAGAGTGGATATGTCCGAATATATGGAGAAACATTCGACTTCACGTCT
TGTCGGTTCTCCTCCGGGATATGTCGGCTATGATGAAGGCGGCCAGCTGACGGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTACTGCTTGATGAAATTGAAAAAGCGCATCCTGATGTGTTTAACATTCTTCTGCAAGTGCTTGAAGACGGACGCTTG
ACTGATTCAAAGGGACGCACTGTTGATTTCCGCAATACGATCCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTGGGCTTCAATGTGCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTCATGGGAGAGC
TGAAGCGTGCCTTCAGACCTGAATTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT
ACAGACATCGTGTCGCTTATGTCTGACCAATTAACAAAACGTCTGAAAGAACAAGATCTCTCTATAGAGCTGACGGATGT
TGCAAAAGCAAAAGTAGCAGACGAGGGCGTCGACTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGACCGGTTATCAGAAGAGCTTCTCAGAGGCAATATTGATAAAGGCCAGCACATCGTTCTTGACGTTGAAGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.301 |
100 |
0.963 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.689 |
99.014 |
0.492 |
| clpC | Streptococcus thermophilus LMD-9 |
46.359 |
100 |
0.471 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.117 |
100 |
0.469 |
| clpC | Streptococcus mutans UA159 |
44.511 |
100 |
0.455 |
| clpC | Streptococcus pneumoniae D39 |
45.264 |
100 |
0.454 |
| clpC | Streptococcus pneumoniae Rx1 |
45.264 |
100 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.141 |
100 |
0.453 |
| clpE | Streptococcus mutans UA159 |
53.929 |
80.025 |
0.432 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.568 |
81.628 |
0.429 |
| clpE | Streptococcus pneumoniae Rx1 |
52.568 |
81.628 |
0.429 |
| clpE | Streptococcus pneumoniae D39 |
52.568 |
81.628 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.568 |
81.628 |
0.429 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.145 |
84.834 |
0.425 |