Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   AUL54_RS09020 Genome accession   NZ_CP013950
Coordinates   1916357..1916755 (+) Length   132 a.a.
NCBI ID   WP_047476185.1    Uniprot ID   A0AAI8N1U7
Organism   Bacillus sp. SDLI1     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1911357..1921755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AUL54_RS09000 (AUL54_09005) - 1913756..1914118 (-) 363 WP_060963633.1 helix-turn-helix domain-containing protein -
  AUL54_RS09005 (AUL54_09010) hxlA 1914351..1914986 (+) 636 WP_016936796.1 3-hexulose-6-phosphate synthase -
  AUL54_RS09010 (AUL54_09015) hxlB 1914983..1915540 (+) 558 WP_060963634.1 6-phospho-3-hexuloisomerase -
  AUL54_RS09015 (AUL54_09020) nucA/comI 1915898..1916335 (+) 438 WP_060963635.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AUL54_RS09020 (AUL54_09025) nin/comJ 1916357..1916755 (+) 399 WP_047476185.1 competence protein ComJ Regulator
  AUL54_RS09025 (AUL54_09030) - 1916915..1917185 (-) 271 Protein_1838 family 1 glycosylhydrolase -
  AUL54_RS09030 (AUL54_09035) - 1917286..1917609 (-) 324 WP_060963637.1 YckD family protein -
  AUL54_RS09035 (AUL54_09040) - 1917682..1918116 (-) 435 WP_060963638.1 RDD family protein -
  AUL54_RS09040 (AUL54_09045) - 1918133..1919269 (-) 1137 WP_060965076.1 zinc-dependent alcohol dehydrogenase -
  AUL54_RS09045 (AUL54_09050) - 1919333..1920535 (-) 1203 WP_060963639.1 GTP-binding protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14940.01 Da        Isoelectric Point: 4.6564

>NTDB_id=166470 AUL54_RS09020 WP_047476185.1 1916357..1916755(+) (nin/comJ) [Bacillus sp. SDLI1]
MIKSWKPQELIISYHQFTIFQKDSEPPVIDWTDEAIEKGFAEADGAVSFEARRNTKAFIVLRLNTNEPVPSYEKKAAVSF
EAVKDGIEIESVMSKRLFFDLPKGRYSLTCYSVPAELSDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=166470 AUL54_RS09020 WP_047476185.1 1916357..1916755(+) (nin/comJ) [Bacillus sp. SDLI1]
TTGATTAAATCATGGAAACCGCAAGAACTTATCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCCGAACCGCC
TGTTATCGATTGGACGGATGAAGCCATTGAAAAAGGATTTGCGGAGGCTGACGGAGCTGTTTCTTTTGAAGCAAGGAGAA
ATACGAAGGCATTTATTGTCCTCAGGCTTAATACAAATGAACCGGTGCCATCCTATGAGAAAAAAGCGGCTGTTTCTTTT
GAAGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAACGGCTTTTCTTCGATCTTCCGAAAGGCCGATACAG
CCTTACTTGTTATTCAGTGCCTGCCGAATTATCCGACCTGCATGCAGATACGTATATTATCGATGCGGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75

Multiple sequence alignment