Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AWC37_RS05670 | Genome accession | NZ_CP013922 |
| Coordinates | 1160785..1161759 (-) | Length | 324 a.a. |
| NCBI ID | WP_038678556.1 | Uniprot ID | - |
| Organism | Staphylococcus xylosus strain S170 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1155785..1166759
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWC37_RS05630 (AWC37_05575) | gcvT | 1156325..1157416 (-) | 1092 | WP_058625684.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AWC37_RS05635 (AWC37_05580) | - | 1157604..1158104 (-) | 501 | WP_037557022.1 | shikimate kinase | - |
| AWC37_RS05645 (AWC37_05590) | comGF | 1158284..1158715 (-) | 432 | WP_231291662.1 | competence type IV pilus minor pilin ComGF | - |
| AWC37_RS05650 (AWC37_05595) | - | 1158699..1158998 (-) | 300 | WP_029377194.1 | hypothetical protein | - |
| AWC37_RS05655 (AWC37_05600) | comGD | 1158985..1159431 (-) | 447 | WP_038679684.1 | competence type IV pilus minor pilin ComGD | - |
| AWC37_RS05660 (AWC37_05605) | comGC | 1159409..1159726 (-) | 318 | WP_029377192.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AWC37_RS05665 (AWC37_05610) | comGB | 1159746..1160813 (-) | 1068 | WP_051664335.1 | competence type IV pilus assembly protein ComGB | - |
| AWC37_RS05670 (AWC37_05615) | comGA | 1160785..1161759 (-) | 975 | WP_038678556.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AWC37_RS05675 (AWC37_05620) | - | 1161858..1162481 (-) | 624 | WP_029377189.1 | MBL fold metallo-hydrolase | - |
| AWC37_RS05680 (AWC37_05625) | - | 1162483..1162806 (-) | 324 | WP_029377188.1 | MTH1187 family thiamine-binding protein | - |
| AWC37_RS05685 (AWC37_05630) | - | 1162806..1163792 (-) | 987 | WP_029377187.1 | glucokinase | - |
| AWC37_RS05690 (AWC37_05635) | - | 1164174..1164371 (-) | 198 | WP_029377186.1 | YqgQ family protein | - |
| AWC37_RS05695 (AWC37_05640) | - | 1164355..1165812 (-) | 1458 | WP_029377185.1 | rhomboid family intramembrane serine protease | - |
| AWC37_RS05700 (AWC37_05645) | - | 1165824..1166366 (-) | 543 | WP_029377184.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| AWC37_RS05705 (AWC37_05650) | rpmG | 1166497..1166646 (-) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37124.26 Da Isoelectric Point: 9.2411
>NTDB_id=166118 AWC37_RS05670 WP_038678556.1 1160785..1161759(-) (comGA) [Staphylococcus xylosus strain S170]
MNLLFNSMIEKAISNDASDIHFIPADKEVMIKFRIRDDLKSIETLQLNTYLKLLTYMKYQAGLDVSKHNAAQSGRYIYKL
KQIYFLRISTLPLSLGNESCVIRIIPQYFQKHKNNQNITHLYNLMNKKQGLILLSGPTGSGKSTLMYHMLSYAKENLNLN
IITIEEPVEQLINGITQISLNEKAGINYETSFKAILRCDPDIILIGEIRDANVAKHVIQASLSGHLVLSTIHASNCKGVI
LRLLEMGITVQQLIQSITSILNQRLITNVKGERELVYEQITKEDVYHFFKNSYTLPKEFHNLSYKLNKMSKEGMICETSM
ERYL
MNLLFNSMIEKAISNDASDIHFIPADKEVMIKFRIRDDLKSIETLQLNTYLKLLTYMKYQAGLDVSKHNAAQSGRYIYKL
KQIYFLRISTLPLSLGNESCVIRIIPQYFQKHKNNQNITHLYNLMNKKQGLILLSGPTGSGKSTLMYHMLSYAKENLNLN
IITIEEPVEQLINGITQISLNEKAGINYETSFKAILRCDPDIILIGEIRDANVAKHVIQASLSGHLVLSTIHASNCKGVI
LRLLEMGITVQQLIQSITSILNQRLITNVKGERELVYEQITKEDVYHFFKNSYTLPKEFHNLSYKLNKMSKEGMICETSM
ERYL
Nucleotide
Download Length: 975 bp
>NTDB_id=166118 AWC37_RS05670 WP_038678556.1 1160785..1161759(-) (comGA) [Staphylococcus xylosus strain S170]
TTGAATCTATTGTTTAATAGTATGATTGAAAAGGCAATTAGTAATGATGCATCAGATATTCATTTTATCCCCGCTGATAA
AGAAGTAATGATTAAATTTAGAATACGTGATGATTTGAAGTCTATAGAAACATTGCAATTAAATACGTATTTAAAATTAT
TAACCTATATGAAATACCAAGCTGGATTAGATGTCTCTAAACATAATGCTGCACAGAGTGGTAGATATATTTATAAATTA
AAACAAATTTACTTCCTTAGAATATCAACGCTTCCTTTATCACTAGGAAATGAAAGCTGTGTTATTAGGATTATTCCGCA
ATATTTTCAAAAGCATAAAAATAATCAGAACATAACGCATTTATATAATCTAATGAATAAAAAACAAGGATTAATTTTAT
TAAGTGGACCTACTGGCTCTGGAAAAAGTACGTTAATGTATCACATGTTATCTTATGCTAAAGAGAACTTAAATTTAAAT
ATAATTACAATTGAAGAACCCGTTGAACAATTAATAAATGGCATAACTCAAATATCTTTAAATGAAAAGGCAGGGATAAA
TTATGAAACTTCTTTTAAAGCTATTTTACGCTGCGATCCAGATATTATCTTGATCGGAGAAATAAGAGATGCAAACGTAG
CTAAACATGTCATACAAGCCAGTTTAAGTGGTCATTTAGTACTTTCGACAATTCATGCTAGTAATTGCAAAGGAGTTATT
TTAAGACTGCTAGAAATGGGGATAACGGTTCAACAACTCATACAATCAATCACTAGCATATTAAATCAAAGGCTTATTAC
TAACGTAAAAGGTGAAAGAGAGCTTGTATATGAACAGATAACTAAAGAAGATGTTTATCACTTCTTTAAAAATAGCTATA
CATTACCCAAAGAATTTCATAACTTATCTTATAAACTAAATAAAATGTCAAAAGAGGGGATGATATGTGAAACATCAATG
GAACGTTATCTCTAA
TTGAATCTATTGTTTAATAGTATGATTGAAAAGGCAATTAGTAATGATGCATCAGATATTCATTTTATCCCCGCTGATAA
AGAAGTAATGATTAAATTTAGAATACGTGATGATTTGAAGTCTATAGAAACATTGCAATTAAATACGTATTTAAAATTAT
TAACCTATATGAAATACCAAGCTGGATTAGATGTCTCTAAACATAATGCTGCACAGAGTGGTAGATATATTTATAAATTA
AAACAAATTTACTTCCTTAGAATATCAACGCTTCCTTTATCACTAGGAAATGAAAGCTGTGTTATTAGGATTATTCCGCA
ATATTTTCAAAAGCATAAAAATAATCAGAACATAACGCATTTATATAATCTAATGAATAAAAAACAAGGATTAATTTTAT
TAAGTGGACCTACTGGCTCTGGAAAAAGTACGTTAATGTATCACATGTTATCTTATGCTAAAGAGAACTTAAATTTAAAT
ATAATTACAATTGAAGAACCCGTTGAACAATTAATAAATGGCATAACTCAAATATCTTTAAATGAAAAGGCAGGGATAAA
TTATGAAACTTCTTTTAAAGCTATTTTACGCTGCGATCCAGATATTATCTTGATCGGAGAAATAAGAGATGCAAACGTAG
CTAAACATGTCATACAAGCCAGTTTAAGTGGTCATTTAGTACTTTCGACAATTCATGCTAGTAATTGCAAAGGAGTTATT
TTAAGACTGCTAGAAATGGGGATAACGGTTCAACAACTCATACAATCAATCACTAGCATATTAAATCAAAGGCTTATTAC
TAACGTAAAAGGTGAAAGAGAGCTTGTATATGAACAGATAACTAAAGAAGATGTTTATCACTTCTTTAAAAATAGCTATA
CATTACCCAAAGAATTTCATAACTTATCTTATAAACTAAATAAAATGTCAAAAGAGGGGATGATATGTGAAACATCAATG
GAACGTTATCTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
62.346 |
100 |
0.623 |
| comGA | Staphylococcus aureus N315 |
62.346 |
100 |
0.623 |