Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   AV904_RS10630 Genome accession   NZ_CP013911
Coordinates   2185790..2186458 (-) Length   222 a.a.
NCBI ID   WP_037558332.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain S167     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2180790..2191458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AV904_RS10615 (AV904_10630) - 2181965..2183956 (-) 1992 WP_037558329.1 ABC transporter permease -
  AV904_RS10620 (AV904_10635) - 2183958..2184707 (-) 750 WP_037558330.1 ABC transporter ATP-binding protein -
  AV904_RS10625 (AV904_10640) braS 2184891..2185787 (-) 897 WP_037558331.1 sensor histidine kinase Regulator
  AV904_RS10630 (AV904_10645) braR 2185790..2186458 (-) 669 WP_037558332.1 response regulator transcription factor Regulator
  AV904_RS12855 - 2186488..2186652 (-) 165 WP_011274729.1 hypothetical protein -
  AV904_RS12860 - 2186838..2187008 (-) 171 WP_169301455.1 hypothetical protein -
  AV904_RS10635 (AV904_10650) - 2187407..2188882 (+) 1476 WP_053038674.1 alkaline phosphatase -
  AV904_RS10640 (AV904_10655) - 2188972..2189919 (-) 948 WP_037558334.1 LCP family protein -
  AV904_RS10645 (AV904_10660) wecB 2190014..2191153 (-) 1140 WP_037558335.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -

Sequence


Protein


Download         Length: 222 a.a.        Molecular weight: 25672.47 Da        Isoelectric Point: 4.5652

>NTDB_id=166015 AV904_RS10630 WP_037558332.1 2185790..2186458(-) (braR) [Staphylococcus haemolyticus strain S167]
MKVFIVEDDFVIAESLEQELSKWNYEVIVAKQFDNIIDVFNANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEITVKDCKLVVDEATLYHQDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=166015 AV904_RS10630 WP_037558332.1 2185790..2186458(-) (braR) [Staphylococcus haemolyticus strain S167]
ATGAAAGTATTCATCGTGGAAGATGATTTTGTCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTAATGCAAATCAACCACAACTCGTGTTGCTCGATATCAATC
TACCGACGTTCAATGGTTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTGCCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCGATTCAAATGGGCGGCGATGATTTTATCGAGAAACCATTTAATTTATCGTTAAC
GGTAACTAAGATTCAAGCACTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAATTACAGTTAAAGACTGCA
AACTTGTTGTAGATGAAGCAACGCTATATCACCAAGACGAATCGGTTCAATTATCTTTTACTGAATTACAAATTTTAAAT
ATGTTGTTTCGTAATGAAGGTAAGTATGTTAGCCGTACAGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTGGGATATAAGGTGTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

99.55

0.784


Multiple sequence alignment