Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   AV904_RS10625 Genome accession   NZ_CP013911
Coordinates   2184891..2185787 (-) Length   298 a.a.
NCBI ID   WP_037558331.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain S167     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2179891..2190787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AV904_RS10610 (AV904_10625) - 2180686..2181876 (-) 1191 WP_033079697.1 DUF4064 domain-containing protein -
  AV904_RS10615 (AV904_10630) - 2181965..2183956 (-) 1992 WP_037558329.1 ABC transporter permease -
  AV904_RS10620 (AV904_10635) - 2183958..2184707 (-) 750 WP_037558330.1 ABC transporter ATP-binding protein -
  AV904_RS10625 (AV904_10640) braS 2184891..2185787 (-) 897 WP_037558331.1 sensor histidine kinase Regulator
  AV904_RS10630 (AV904_10645) braR 2185790..2186458 (-) 669 WP_037558332.1 response regulator transcription factor Regulator
  AV904_RS12855 - 2186488..2186652 (-) 165 WP_011274729.1 hypothetical protein -
  AV904_RS12860 - 2186838..2187008 (-) 171 WP_169301455.1 hypothetical protein -
  AV904_RS10635 (AV904_10650) - 2187407..2188882 (+) 1476 WP_053038674.1 alkaline phosphatase -
  AV904_RS10640 (AV904_10655) - 2188972..2189919 (-) 948 WP_037558334.1 LCP family protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34639.27 Da        Isoelectric Point: 6.4975

>NTDB_id=166014 AV904_RS10625 WP_037558331.1 2184891..2185787(-) (braS) [Staphylococcus haemolyticus strain S167]
MLKAFIKSILNEIIIIITFILLFLLIFFLFNLPLSAFLLGAGIMLFIMIIYWLVQLSGFKEQVQMADTIHELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDL
VRPLIMKYSIQFIDQKTKIHYERCEDEVLTDAQWCSIMIEQILNNALKYARGKDIWITFDQQQHVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKYISQHLHHLVDVQSELNKGTAFSIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=166014 AV904_RS10625 WP_037558331.1 2184891..2185787(-) (braS) [Staphylococcus haemolyticus strain S167]
ATGCTGAAAGCTTTTATTAAATCAATATTAAATGAAATCATTATAATCATCACATTTATATTGCTATTCTTACTTATCTT
CTTTCTATTTAATCTGCCATTGAGTGCGTTTCTATTAGGCGCCGGAATTATGCTATTCATCATGATAATTTATTGGTTAG
TTCAATTAAGTGGATTTAAAGAACAAGTACAGATGGCAGATACTATTCATGAACTAGAGCATGAATTGCAACAGGTAAAA
AGTGATCAGACTGAATATCAAGCTAATGTGGAGAATTACTTCTTAACATGGGTTCATCAAATGAAGACACCTATTACAGC
ATCTAAATTGTTGTTAGAGCGTAATGAAGATAATGTCGTCAATCGAGTGCGGCAAGAAATTATTCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTGATGAACCAGGAAACGGATATGTCCTTTTCAAAAGTGAAGATTAATGACCTT
GTCCGTCCATTAATTATGAAATATTCTATTCAATTTATTGATCAGAAGACAAAGATTCATTATGAACGGTGTGAGGATGA
AGTTCTGACTGATGCACAATGGTGTTCAATAATGATTGAACAGATTCTAAATAATGCATTGAAGTATGCACGAGGTAAGG
ACATTTGGATTACGTTTGACCAACAACAGCATGTATTAACTATTCGTGATAATGGCGTCGGTATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAATATATATCGCAACATTTACATCATCTTGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAGTATTTATT
TCCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

62.671

97.987

0.614

Multiple sequence alignment