Detailed information NTG0165966

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BGL51_RS09850
• Genome accession: NZ_CP017064
• Coordinates: 1851328..1852428 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain ST3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1846328..1857428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BGL51_RS09825 (BGL51_09720)	pgsA	1846870..1847412 (-)	543	WP_095559494.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BGL51_RS09830 (BGL51_09725)	-	1847425..1848282 (-)	858	WP_014608803.1	helix-turn-helix domain-containing protein	-
BGL51_RS09835 (BGL51_09730)	yfmH	1848341..1849618 (-)	1278	WP_011226704.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
BGL51_RS09840 (BGL51_09735)	yfmF	1849620..1850870 (-)	1251	WP_002952285.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
BGL51_RS09845 (BGL51_09740)	yaaA	1850948..1851325 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
BGL51_RS09850 (BGL51_09745)	recF	1851328..1852428 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
BGL51_RS09855 (BGL51_09750)	guaB	1852597..1854078 (-)	1482	WP_011227627.1	IMP dehydrogenase	-
BGL51_RS09860 (BGL51_09755)	trpS	1854255..1855277 (-)	1023	WP_095559495.1	tryptophan--tRNA ligase	-
BGL51_RS09865 (BGL51_09760)	-	1855705..1856577 (+)	873	WP_064355694.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=165966 BGL51_RS09850 WP_002947786.1 1851328..1852428(+) (recF) [Streptococcus thermophilus strain ST3]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=165966 BGL51_RS09850 WP_002947786.1 1851328..1852428(+) (recF) [Streptococcus thermophilus strain ST3]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCACCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACGGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432