Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   MGAS11027_RS09625 Genome accession   NZ_CP013838
Coordinates   48102..48197 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS11027     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 43102..53197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS11027_RS00245 (MGAS11027_0052) purK 43172..44245 (+) 1074 WP_023611330.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  MGAS11027_RS00250 (MGAS11027_0053) - 44247..45665 (+) 1419 WP_023612101.1 hypothetical protein -
  MGAS11027_RS00255 (MGAS11027_0054) purB 45685..46977 (+) 1293 WP_023612104.1 adenylosuccinate lyase -
  MGAS11027_RS00260 (MGAS11027_0055) comR 47107..48018 (+) 912 WP_002986681.1 transcriptional regulator Rgg4/ComR Regulator
  MGAS11027_RS09625 (MGAS11027_0056) comS 48102..48197 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  MGAS11027_RS00265 (MGAS11027_0057) ruvB 48244..49242 (+) 999 WP_002986679.1 Holliday junction branch migration DNA helicase RuvB -
  MGAS11027_RS00270 (MGAS11027_0058) - 49380..49817 (+) 438 WP_020904819.1 low molecular weight protein-tyrosine-phosphatase -
  MGAS11027_RS00275 (MGAS11027_0059) - 49841..50242 (+) 402 WP_002986671.1 MORN repeat-containing protein -
  MGAS11027_RS00280 (MGAS11027_0060) - 50239..52014 (+) 1776 WP_014407199.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=165040 MGAS11027_RS09625 WP_198462994.1 48102..48197(+) (comS) [Streptococcus pyogenes strain MGAS11027]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=165040 MGAS11027_RS09625 WP_198462994.1 48102..48197(+) (comS) [Streptococcus pyogenes strain MGAS11027]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment