Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AVR82_RS10620 Genome accession   NZ_CP013749
Coordinates   2218764..2220041 (+) Length   425 a.a.
NCBI ID   WP_003640733.1    Uniprot ID   A0A0G9FEC4
Organism   Lactiplantibacillus plantarum strain KP     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2213764..2225041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AVR82_RS10595 (AVR82_10580) tsf 2214660..2215538 (+) 879 WP_003644498.1 translation elongation factor Ts -
  AVR82_RS10600 (AVR82_10585) pyrH 2215739..2216461 (+) 723 WP_003640737.1 UMP kinase -
  AVR82_RS10605 (AVR82_10590) frr 2216463..2217026 (+) 564 WP_003640736.1 ribosome recycling factor -
  AVR82_RS10610 (AVR82_10595) - 2217146..2217925 (+) 780 WP_003640735.1 isoprenyl transferase -
  AVR82_RS10615 (AVR82_10600) - 2217941..2218726 (+) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  AVR82_RS10620 (AVR82_10605) eeP 2218764..2220041 (+) 1278 WP_003640733.1 RIP metalloprotease RseP Regulator
  AVR82_RS10625 (AVR82_10610) - 2220081..2221790 (+) 1710 WP_003640732.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45841.33 Da        Isoelectric Point: 9.5616

>NTDB_id=164676 AVR82_RS10620 WP_003640733.1 2218764..2220041(+) (eeP) [Lactiplantibacillus plantarum strain KP]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=164676 AVR82_RS10620 WP_003640733.1 2218764..2220041(+) (eeP) [Lactiplantibacillus plantarum strain KP]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGGGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGTATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGCCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAAATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAACGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATATATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains


Predicted by InterproScan.

(7-411)

(210-260)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0G9FEC4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.832

100

0.492

  eeP Streptococcus thermophilus LMD-9

48.832

100

0.492


Multiple sequence alignment