Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AVJ22_RS06685 | Genome accession | NZ_CP013714 |
| Coordinates | 1390829..1391803 (-) | Length | 324 a.a. |
| NCBI ID | WP_065338117.1 | Uniprot ID | - |
| Organism | Staphylococcus equorum strain C2014 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1385829..1396803
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVJ22_RS06645 (AVJ22_06635) | gcvT | 1386374..1387465 (-) | 1092 | WP_065338111.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AVJ22_RS06650 (AVJ22_06640) | - | 1387643..1388158 (-) | 516 | WP_065338112.1 | shikimate kinase | - |
| AVJ22_RS06660 (AVJ22_06650) | comGF | 1388323..1388766 (-) | 444 | WP_065338113.1 | competence type IV pilus minor pilin ComGF | - |
| AVJ22_RS06665 (AVJ22_06655) | - | 1388738..1389037 (-) | 300 | WP_065338114.1 | hypothetical protein | - |
| AVJ22_RS14580 (AVJ22_06660) | comGD | 1389024..1389470 (-) | 447 | WP_065338115.1 | competence type IV pilus minor pilin ComGD | - |
| AVJ22_RS06675 (AVJ22_06665) | comGC | 1389448..1389765 (-) | 318 | WP_065339156.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AVJ22_RS06680 (AVJ22_06670) | comGB | 1389790..1390857 (-) | 1068 | WP_065338116.1 | competence type IV pilus assembly protein ComGB | - |
| AVJ22_RS06685 (AVJ22_06675) | comGA | 1390829..1391803 (-) | 975 | WP_065338117.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AVJ22_RS06690 (AVJ22_06680) | - | 1391899..1392522 (-) | 624 | WP_065338118.1 | MBL fold metallo-hydrolase | - |
| AVJ22_RS06695 (AVJ22_06685) | - | 1392524..1392847 (-) | 324 | WP_065338119.1 | MTH1187 family thiamine-binding protein | - |
| AVJ22_RS06700 (AVJ22_06690) | - | 1392847..1393833 (-) | 987 | WP_065338120.1 | glucokinase | - |
| AVJ22_RS06705 (AVJ22_06695) | - | 1394418..1394618 (-) | 201 | WP_002512453.1 | YqgQ family protein | - |
| AVJ22_RS06710 (AVJ22_06700) | - | 1394602..1396059 (-) | 1458 | WP_065338121.1 | rhomboid family intramembrane serine protease | - |
| AVJ22_RS06715 (AVJ22_06705) | - | 1396074..1396613 (-) | 540 | WP_065338122.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37271.43 Da Isoelectric Point: 8.8694
>NTDB_id=164282 AVJ22_RS06685 WP_065338117.1 1390829..1391803(-) (comGA) [Staphylococcus equorum strain C2014]
MKLLFNNIIEKAIQRNATDIHFIPSEKAVYIKFRIQDDLIFIESIQTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQLFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYALMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGITQVSINEKAGINYESSFKAILRCDPDIILIGEVRDLTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEINQSILSVLNQRLITIYDSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI
MKLLFNNIIEKAIQRNATDIHFIPSEKAVYIKFRIQDDLIFIESIQTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQLFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYALMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGITQVSINEKAGINYESSFKAILRCDPDIILIGEVRDLTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEINQSILSVLNQRLITIYDSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI
Nucleotide
Download Length: 975 bp
>NTDB_id=164282 AVJ22_RS06685 WP_065338117.1 1390829..1391803(-) (comGA) [Staphylococcus equorum strain C2014]
TTGAAGCTATTATTCAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGCAGTGTATATCAAATTTAGAATTCAGGATGATTTAATTTTTATTGAATCAATTCAGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAACTATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATTATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATGCATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGCCCAACTGGATCTGGTAAAAGTACGTTAATGTATCAAATGGTTATGTATGCAAAAGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAGGATCCGGTGGAACAATTAGTTGAGGGCATTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTTAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCTTACGATAG
CAAAATACGTGATACAAGCAAGTTTAAGTGGTCACTTAGTACTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATGACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA
TTGAAGCTATTATTCAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGCAGTGTATATCAAATTTAGAATTCAGGATGATTTAATTTTTATTGAATCAATTCAGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAACTATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATTATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATGCATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGCCCAACTGGATCTGGTAAAAGTACGTTAATGTATCAAATGGTTATGTATGCAAAAGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAGGATCCGGTGGAACAATTAGTTGAGGGCATTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTTAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCTTACGATAG
CAAAATACGTGATACAAGCAAGTTTAAGTGGTCACTTAGTACTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATGACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.802 |
100 |
0.608 |
| comGA | Staphylococcus aureus N315 |
60.802 |
100 |
0.608 |