Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   AU077_RS10000 Genome accession   NZ_CP013688
Coordinates   1965914..1966690 (-) Length   258 a.a.
NCBI ID   WP_058621987.1    Uniprot ID   A0A380K480
Organism   Streptococcus gallolyticus strain ICDDRB-NRC-S1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1960914..1971690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AU077_RS09980 (AU077_09980) - 1962066..1962260 (-) 195 WP_014293700.1 DUF951 domain-containing protein -
  AU077_RS09985 (AU077_09985) - 1962272..1962930 (-) 659 Protein_1981 diacylglycerol/lipid kinase family protein -
  AU077_RS09990 (AU077_09990) dnaN 1963061..1964197 (-) 1137 WP_014293698.1 DNA polymerase III subunit beta -
  AU077_RS09995 (AU077_09995) dnaA 1964355..1965710 (-) 1356 WP_014293697.1 chromosomal replication initiator protein DnaA -
  AU077_RS10000 (AU077_10000) spo0J 1965914..1966690 (-) 777 WP_058621987.1 ParB/RepB/Spo0J family partition protein Regulator
  AU077_RS10005 (AU077_10005) htrA 1966760..1967992 (-) 1233 WP_307777631.1 S1C family serine protease Regulator
  AU077_RS10010 (AU077_10010) rlmH 1968237..1968716 (+) 480 WP_014295514.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AU077_RS10955 - 1969174..1970193 (-) 1020 Protein_1987 IS30 family transposase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29690.40 Da        Isoelectric Point: 9.7762

>NTDB_id=164082 AU077_RS10000 WP_058621987.1 1965914..1966690(-) (spo0J) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MPETLTLIKTENISPNPYQPRLEFKQEELEELARSIKTNGLIQPIIVRESTVFGYELIAGERRLRASKMAGLTEIPAIIK
NISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMTHEELAQFMGKSRPYITNCLRLLNLPKSLSDAVEKGELSQG
HARVLLTLKNVEDQEKWYQKILTEDISVRKLEHLLKPAKKKKNRPKKKDIFVRNQEEELTKQLGLPVKITISKTGTKGEV
SLHFQSEEDLNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=164082 AU077_RS10000 WP_058621987.1 1965914..1966690(-) (spo0J) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGCCTGAAACACTCACATTAATCAAAACTGAAAATATCTCACCTAATCCCTACCAACCCCGTTTAGAATTTAAACAAGA
GGAGCTAGAAGAACTAGCACGTTCGATTAAAACTAATGGGCTTATTCAGCCGATTATCGTCCGAGAATCAACTGTCTTTG
GTTATGAGCTTATTGCTGGTGAAAGACGTCTAAGAGCCTCAAAAATGGCAGGTTTAACCGAAATTCCTGCTATCATAAAA
AATATCTCCAATCAGGAGAGCATGCAGCTGGCTATCGTTGAAAATTTGCAACGTTCTGATTTAAATCCAATCGAAGAAGC
AAAAGCTTACCAGCAGCTTCTGGAAAAAAATCAAATGACCCATGAAGAATTAGCACAATTTATGGGAAAATCTCGCCCCT
ACATTACCAATTGTCTCAGATTACTTAACCTTCCTAAAAGTCTCTCTGATGCCGTTGAAAAAGGTGAGCTGTCTCAAGGA
CACGCGCGTGTTCTTTTAACCCTTAAAAATGTGGAAGATCAAGAGAAGTGGTATCAAAAAATTCTGACAGAGGATATTAG
CGTTAGAAAACTTGAACATTTACTAAAACCTGCTAAAAAGAAAAAAAATCGTCCCAAAAAGAAAGATATTTTCGTTCGAA
ATCAAGAAGAAGAATTGACCAAACAGTTAGGACTTCCTGTTAAAATTACCATCTCTAAAACTGGCACAAAAGGAGAGGTG
AGTTTACATTTTCAATCTGAAGAAGACTTAAACAGAATTATCAACAAGCTAAAATAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(149-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380K480

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

59.922

99.612

0.597

Multiple sequence alignment