Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   AU077_RS07270 Genome accession   NZ_CP013688
Coordinates   1464362..1465447 (-) Length   361 a.a.
NCBI ID   WP_014294114.1    Uniprot ID   A0A380K6B4
Organism   Streptococcus gallolyticus strain ICDDRB-NRC-S1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1459362..1470447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AU077_RS07240 (AU077_07240) - 1459977..1460555 (-) 579 WP_014294121.1 YutD family protein -
  AU077_RS07245 (AU077_07245) - 1460587..1461912 (-) 1326 WP_058621857.1 bifunctional metallophosphatase/5'-nucleotidase -
  AU077_RS07250 (AU077_07250) - 1462025..1462534 (-) 510 WP_014294119.1 hypothetical protein -
  AU077_RS07255 (AU077_07255) - 1462673..1463342 (-) 670 Protein_1495 MIP/aquaporin family protein -
  AU077_RS07260 (AU077_07260) - 1463418..1463906 (+) 489 Protein_1496 transposase -
  AU077_RS07265 (AU077_07265) - 1463979..1464233 (-) 255 WP_014294115.1 DUF3923 family protein -
  AU077_RS07270 (AU077_07270) sepM 1464362..1465447 (-) 1086 WP_014294114.1 SepM family pheromone-processing serine protease Regulator
  AU077_RS07275 (AU077_07275) coaD 1465425..1465922 (-) 498 WP_058621858.1 pantetheine-phosphate adenylyltransferase -
  AU077_RS07280 (AU077_07280) rsmD 1465955..1466494 (-) 540 WP_039670565.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  AU077_RS07285 (AU077_07285) - 1466627..1467385 (+) 759 Protein_1501 hypothetical protein -
  AU077_RS07290 (AU077_07290) asnA 1467519..1468511 (-) 993 WP_014294109.1 aspartate--ammonia ligase -
  AU077_RS07295 (AU077_07295) - 1468884..1470099 (-) 1216 Protein_1503 MFS transporter -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39123.86 Da        Isoelectric Point: 4.1372

>NTDB_id=164057 AU077_RS07270 WP_014294114.1 1464362..1465447(-) (sepM) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MAILKRFKEILKKLGRILYRFKWWILGVVGIAFLLFSLLYPLDYYIEMPGGVYDIRSVLTVDNKEDDEDGSYNFVAVKVS
QATLAQLVYAWLTPYTEISTAADVTGGYSNADYLRINEYYMETSQNTATYQALTLAGKEATLDYQGVYVLNVSDNSTFKG
ILNIADTVTGVNGQTFNSSAELMAYVADLDLGSEVTVQYTSDGEAKEATGKIIELSNGKNGIGIGLVDHTSVSSDVDVDF
HTSGVGGPSAGLMFTLDIYDQLNGEDLRKGRKIAGTGTIESDGSVGDIGGAALKVVAAAKAGADIFFVPNNPVDEETLKK
DPDAKTNYEEAVEAAKDLDTDMKIVPVTTVQEAIDYLRNND

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=164057 AU077_RS07270 WP_014294114.1 1464362..1465447(-) (sepM) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGGCAATCTTAAAAAGATTTAAAGAGATTTTGAAAAAGTTGGGTCGTATTTTATATCGCTTTAAGTGGTGGATATTAGG
TGTTGTAGGCATTGCTTTCTTACTATTTAGCTTGTTGTATCCGCTTGATTACTATATTGAAATGCCTGGTGGTGTTTATG
ATATTCGTAGCGTTTTAACAGTTGATAATAAGGAAGATGATGAAGATGGCTCTTATAATTTTGTGGCTGTCAAGGTTAGT
CAGGCGACCTTGGCACAATTGGTTTATGCTTGGTTAACTCCCTACACAGAAATTTCGACAGCCGCAGATGTGACTGGTGG
TTATAGCAATGCTGATTATCTTCGTATCAATGAGTATTACATGGAAACCTCTCAAAATACAGCGACTTATCAAGCCTTAA
CCTTGGCAGGAAAGGAAGCGACGCTTGATTATCAAGGGGTTTATGTTTTAAATGTTAGTGATAATTCGACGTTTAAAGGG
ATTTTGAATATCGCTGATACGGTAACTGGGGTTAATGGTCAGACATTTAACAGTTCGGCAGAATTAATGGCCTATGTGGC
TGATTTGGATTTAGGGTCTGAGGTAACAGTTCAATATACATCAGACGGCGAAGCAAAAGAAGCCACAGGGAAAATTATTG
AATTGTCAAATGGAAAAAATGGTATCGGAATCGGTTTGGTAGATCATACGTCGGTGTCATCAGATGTTGATGTTGATTTT
CATACGAGTGGTGTCGGTGGTCCAAGTGCTGGTTTGATGTTTACGCTTGATATTTATGACCAATTAAATGGTGAAGATTT
GCGTAAAGGTCGTAAAATTGCTGGTACAGGTACGATTGAATCAGATGGTTCAGTCGGGGATATTGGTGGCGCAGCACTCA
AAGTTGTTGCTGCTGCTAAAGCTGGTGCGGATATTTTCTTTGTTCCAAATAACCCTGTGGATGAGGAAACATTGAAAAAA
GATCCTGATGCGAAAACGAACTATGAAGAAGCTGTCGAAGCTGCTAAAGACCTCGATACCGATATGAAAATCGTCCCAGT
CACAACGGTCCAAGAAGCAATTGACTATCTACGAAACAATGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380K6B4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.742

94.46

0.64


Multiple sequence alignment