Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | AU077_RS03740 | Genome accession | NZ_CP013688 |
| Coordinates | 743308..743748 (+) | Length | 146 a.a. |
| NCBI ID | WP_058622012.1 | Uniprot ID | - |
| Organism | Streptococcus gallolyticus strain ICDDRB-NRC-S1 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 727778..764302 | 743308..743748 | within | 0 |
Gene organization within MGE regions
Location: 727778..764302
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AU077_RS03665 (AU077_03665) | - | 728564..728944 (+) | 381 | WP_039670894.1 | DUF1149 family protein | - |
| AU077_RS03670 (AU077_03670) | - | 728944..729792 (+) | 849 | WP_058621575.1 | DegV family protein | - |
| AU077_RS03675 (AU077_03675) | dapB | 729812..730579 (+) | 768 | WP_014294731.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| AU077_RS03680 (AU077_03680) | - | 730576..731781 (+) | 1206 | WP_039670892.1 | CCA tRNA nucleotidyltransferase | - |
| AU077_RS03685 (AU077_03685) | - | 731778..733649 (+) | 1872 | WP_014294729.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| AU077_RS03690 (AU077_03690) | - | 733727..735466 (+) | 1740 | WP_014294728.1 | ABC transporter ATP-binding protein | - |
| AU077_RS03695 (AU077_03695) | - | 735469..737235 (+) | 1767 | WP_014294727.1 | ABC transporter ATP-binding protein | - |
| AU077_RS03700 (AU077_03700) | queC | 737480..738139 (+) | 660 | WP_058621576.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| AU077_RS03705 (AU077_03705) | queD | 738132..738578 (+) | 447 | WP_014294725.1 | 6-carboxytetrahydropterin synthase QueD | - |
| AU077_RS03710 (AU077_03710) | queE | 738571..739284 (+) | 714 | WP_014294724.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| AU077_RS03715 (AU077_03715) | queF | 739297..739788 (+) | 492 | WP_014294723.1 | preQ(1) synthase | - |
| AU077_RS03720 (AU077_03720) | - | 739844..740341 (-) | 498 | WP_014294722.1 | DUF308 domain-containing protein | - |
| AU077_RS03725 (AU077_03725) | gdhA | 740587..741939 (+) | 1353 | WP_058621577.1 | NADP-specific glutamate dehydrogenase | - |
| AU077_RS03730 (AU077_03730) | - | 742216..742725 (+) | 510 | WP_058621578.1 | GNAT family N-acetyltransferase | - |
| AU077_RS03735 (AU077_03735) | - | 742722..743132 (+) | 411 | WP_014294719.1 | peptide deformylase | - |
| AU077_RS03740 (AU077_03740) | rcrR | 743308..743748 (+) | 441 | WP_058622012.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| AU077_RS03745 (AU077_03745) | rcrP | 743752..745566 (+) | 1815 | WP_058621579.1 | ABC transporter ATP-binding protein | Regulator |
| AU077_RS03750 (AU077_03750) | rcrQ | 745556..747328 (+) | 1773 | WP_014294716.1 | ABC transporter ATP-binding protein | Regulator |
| AU077_RS03755 (AU077_03755) | - | 747594..748570 (+) | 977 | Protein_763 | zinc-binding dehydrogenase | - |
| AU077_RS03760 (AU077_03760) | - | 748560..749012 (+) | 453 | WP_058621580.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| AU077_RS03765 (AU077_03765) | - | 749002..749637 (+) | 636 | WP_058621581.1 | ABC transporter permease | - |
| AU077_RS03770 (AU077_03770) | - | 749627..750547 (+) | 921 | WP_058621582.1 | glycine betaine ABC transporter substrate-binding protein | - |
| AU077_RS03775 (AU077_03775) | - | 750560..751333 (+) | 774 | WP_058621583.1 | ABC transporter ATP-binding protein | - |
| AU077_RS03780 (AU077_03780) | - | 751326..751952 (+) | 627 | WP_014294711.1 | ABC transporter permease | - |
| AU077_RS03785 (AU077_03785) | - | 752088..752711 (+) | 624 | WP_014294710.1 | GTP pyrophosphokinase | - |
| AU077_RS03790 (AU077_03790) | - | 752741..753421 (+) | 681 | WP_058621584.1 | response regulator transcription factor | - |
| AU077_RS03795 (AU077_03795) | - | 753430..754659 (+) | 1230 | WP_058621585.1 | sensor histidine kinase | - |
| AU077_RS03805 (AU077_03805) | - | 755313..755912 (+) | 600 | WP_082306730.1 | restriction endonuclease subunit S | - |
| AU077_RS03810 (AU077_03810) | - | 755905..758991 (+) | 3087 | WP_196479521.1 | type I restriction endonuclease subunit R | - |
| AU077_RS03815 (AU077_03815) | - | 758995..759858 (+) | 864 | WP_058621587.1 | KilA-N domain-containing protein | - |
| AU077_RS03820 (AU077_03820) | - | 759851..761053 (+) | 1203 | WP_058621588.1 | restriction endonuclease subunit S | - |
| AU077_RS03825 (AU077_03825) | - | 761149..762804 (+) | 1656 | WP_058621589.1 | type I restriction-modification system subunit M | - |
| AU077_RS11030 | - | 763105..763383 (+) | 279 | Protein_777 | hypothetical protein | - |
| AU077_RS03830 (AU077_03830) | - | 763463..764302 (-) | 840 | WP_014294703.1 | aldo/keto reductase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 17175.67 Da Isoelectric Point: 9.6229
>NTDB_id=164043 AU077_RS03740 WP_058622012.1 743308..743748(+) (rcrR) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MHKKDPFSQFRDFINLMENRVHALTESYGVENLAGPQGFAVLYLRDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQVVSSKEDKRYKQVVLTELGKSKAQNIQDFHDEIHRQILAGVDHEDLKISFRVFDRILKNLENKE
MHKKDPFSQFRDFINLMENRVHALTESYGVENLAGPQGFAVLYLRDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQVVSSKEDKRYKQVVLTELGKSKAQNIQDFHDEIHRQILAGVDHEDLKISFRVFDRILKNLENKE
Nucleotide
Download Length: 441 bp
>NTDB_id=164043 AU077_RS03740 WP_058622012.1 743308..743748(+) (rcrR) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGCACAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAATGGAAAATCGTGTCCATGCCCTTACGGAAAG
TTATGGTGTTGAAAATCTGGCTGGCCCACAGGGATTTGCGGTATTGTATCTTCGTGATAATCCCGATAAAGAAATTTATA
TCAAGGACATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAGTTGTTTCGTCGAAAGAAGATAAGCGTTATAAGCAAGTGGTGTTGACTGAACTTGGAAAATCAAAGGCTCAGAA
TATTCAAGATTTCCATGATGAAATTCATAGGCAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATCTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA
ATGCACAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAATGGAAAATCGTGTCCATGCCCTTACGGAAAG
TTATGGTGTTGAAAATCTGGCTGGCCCACAGGGATTTGCGGTATTGTATCTTCGTGATAATCCCGATAAAGAAATTTATA
TCAAGGACATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAGTTGTTTCGTCGAAAGAAGATAAGCGTTATAAGCAAGTGGTGTTGACTGAACTTGGAAAATCAAAGGCTCAGAA
TATTCAAGATTTCCATGATGAAATTCATAGGCAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATCTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
55.245 |
97.945 |
0.541 |