Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   AT706_RS12380 Genome accession   NZ_CP013654
Coordinates   2414956..2415612 (-) Length   218 a.a.
NCBI ID   WP_015383354.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain BSD-2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2409956..2420612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT706_RS12355 (AT706_12360) spxH 2410166..2411065 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  AT706_RS12365 (AT706_12370) - 2411380..2411547 (+) 168 WP_003244944.1 hypothetical protein -
  AT706_RS12370 (AT706_12375) pepF 2411585..2413414 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  AT706_RS12375 (AT706_12380) coiA 2413644..2414765 (-) 1122 WP_236822450.1 competence protein CoiA Machinery gene
  AT706_RS21330 - 2414839..2414953 (+) 115 Protein_2451 hypothetical protein -
  AT706_RS12380 (AT706_12385) mecA 2414956..2415612 (-) 657 WP_015383354.1 adaptor protein MecA Regulator
  AT706_RS21335 - 2415579..2415719 (-) 141 WP_119122854.1 hypothetical protein -
  AT706_RS12385 (AT706_12390) yjbE 2415889..2416545 (+) 657 WP_015483086.1 TerC family protein -
  AT706_RS12390 (AT706_12395) spx 2416588..2416983 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  AT706_RS12395 (AT706_12400) yjbC 2417164..2417739 (-) 576 WP_015383352.1 GNAT family N-acetyltransferase -
  AT706_RS12400 (AT706_12405) yjbB 2417903..2419120 (-) 1218 WP_080030656.1 MFS transporter -
  AT706_RS12405 (AT706_12410) oppF 2419226..2420143 (-) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25749.62 Da        Isoelectric Point: 4.0841

>NTDB_id=163538 AT706_RS12380 WP_015383354.1 2414956..2415612(-) (mecA) [Bacillus subtilis subsp. subtilis strain BSD-2]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=163538 AT706_RS12380 WP_015383354.1 2414956..2415612(-) (mecA) [Bacillus subtilis subsp. subtilis strain BSD-2]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCTGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995

Multiple sequence alignment