Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ATM98_RS08350 Genome accession   NZ_CP013651
Coordinates   1716518..1717777 (+) Length   419 a.a.
NCBI ID   WP_061564691.1    Uniprot ID   -
Organism   Streptococcus sp. A12     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1711518..1722777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ATM98_RS08325 (ATM98_08325) - 1711661..1713766 (+) 2106 WP_061564688.1 ATP-dependent Clp protease ATP-binding subunit -
  ATM98_RS08330 (ATM98_08330) - 1714058..1714303 (+) 246 WP_023022151.1 hypothetical protein -
  ATM98_RS08335 (ATM98_08335) yajC 1714450..1714779 (+) 330 WP_061564689.1 preprotein translocase subunit YajC -
  ATM98_RS08340 (ATM98_08340) - 1714912..1715661 (+) 750 WP_048788712.1 isoprenyl transferase -
  ATM98_RS08345 (ATM98_08345) - 1715673..1716476 (+) 804 WP_061564690.1 phosphatidate cytidylyltransferase -
  ATM98_RS08350 (ATM98_08350) eeP 1716518..1717777 (+) 1260 WP_061564691.1 RIP metalloprotease RseP Regulator
  ATM98_RS08355 (ATM98_08355) - 1717795..1719645 (+) 1851 WP_061564692.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 46259.74 Da        Isoelectric Point: 6.1752

>NTDB_id=163432 ATM98_RS08350 WP_061564691.1 1716518..1717777(+) (eeP) [Streptococcus sp. A12]
MQFIAFIIIFGVIVLVHEFGHFYFAKKSGILVREFAIGMGPKIFAHVGKDGTAYTIRILPLGGYVRMAGWGEDTTEIKTG
TPVSLTLNPEGTVVRINLSGKNIDQTALPMNVTDFDFEDKLEITGIVIEETKTYPVHHDATIVEEDGTEVRIAPLDVQYQ
NASIWGRLITNFAGPMNNFILSIVVYSLLAFMRGGAVDYYSNHVQVVPQGVVAKAGLKDNDQIVQINEYKVSNWDELTDS
VQKATRNQGKNPEVTITYERDGKTQKVTVQPEEDGGRYYIGVTNAVKTGFLDKLLSGVTDTWYTATRILTALKDILFHFS
LNKLGGPVAIYKASSQAAELGLPAILSLMAMLSINIGIFNLIPIPALDGGKILINLIELVRRKPLKQEVETYLTLAGVAV
MVILMIAVTWNDIMKLFLK

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=163432 ATM98_RS08350 WP_061564691.1 1716518..1717777(+) (eeP) [Streptococcus sp. A12]
ATGCAATTTATTGCCTTTATTATCATTTTTGGCGTCATTGTCCTGGTACATGAGTTCGGCCATTTCTATTTTGCAAAGAA
ATCAGGCATCCTTGTTCGCGAGTTTGCGATTGGGATGGGGCCAAAGATTTTTGCCCATGTAGGCAAAGACGGAACAGCCT
ATACTATTCGAATCCTTCCATTGGGGGGCTATGTCCGAATGGCAGGCTGGGGCGAAGATACGACAGAGATTAAGACAGGA
ACGCCTGTCAGTCTAACTTTGAACCCTGAGGGAACAGTTGTTCGGATCAACCTTTCTGGGAAAAATATCGACCAGACGGC
TCTTCCCATGAATGTCACAGATTTTGATTTTGAGGATAAACTTGAAATCACAGGAATCGTCATCGAAGAGACCAAGACCT
ATCCTGTCCACCATGATGCGACCATCGTTGAGGAGGATGGGACAGAAGTACGGATTGCTCCTCTAGATGTGCAGTATCAA
AATGCTAGTATCTGGGGACGACTCATTACCAACTTTGCTGGTCCCATGAACAACTTTATCCTGAGTATTGTCGTCTACTC
TCTCCTAGCCTTTATGCGAGGAGGAGCAGTGGACTACTATAGCAACCATGTTCAGGTTGTTCCTCAAGGAGTGGTAGCTA
AGGCTGGTTTGAAAGATAATGACCAGATCGTTCAGATCAATGAATATAAGGTTTCCAACTGGGATGAGTTGACAGATTCT
GTCCAGAAGGCAACCCGTAACCAAGGAAAAAATCCAGAAGTAACGATTACCTATGAACGAGACGGGAAGACTCAAAAAGT
GACGGTCCAACCAGAAGAAGATGGTGGACGCTATTATATCGGTGTGACCAATGCTGTCAAGACGGGCTTCCTCGATAAGC
TTCTGTCAGGTGTGACAGATACTTGGTACACAGCAACTCGTATCTTAACGGCCTTGAAGGATATCCTCTTCCACTTTAGT
TTGAACAAGTTGGGTGGTCCGGTAGCGATCTACAAAGCGAGTTCGCAAGCCGCGGAGCTTGGACTTCCAGCTATCCTGTC
TCTGATGGCCATGTTGTCCATCAATATCGGAATCTTTAACTTGATCCCCATTCCGGCCTTGGATGGTGGAAAAATCTTGA
TCAATCTGATCGAGCTGGTTCGTAGAAAACCGCTGAAGCAGGAGGTAGAGACCTACTTGACCCTTGCTGGAGTGGCGGTC
ATGGTTATCTTGATGATTGCCGTTACTTGGAACGATATTATGAAATTATTTTTGAAATAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(204-269)

Peptidase family M50 (Peptidase_M50)

(5-404)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

64.904

99.284

0.644
  eeP Streptococcus thermophilus LMG 18311

64.663

99.284

0.642

Multiple sequence alignment