Detailed information
Bioinformatically predicted
Overview
| Name | comK/comK1 | Type | Regulator |
| Locus tag | AUC49_RS05020 | Genome accession | NZ_CP013619 |
| Coordinates | 1040878..1041447 (-) | Length | 189 a.a. |
| NCBI ID | WP_000287260.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain RIVM1607 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1035878..1046447
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUC49_RS05000 (AUC49_04990) | - | 1037381..1038739 (+) | 1359 | WP_000021872.1 | TrkH family potassium uptake protein | - |
| AUC49_RS05005 (AUC49_04995) | - | 1038878..1040389 (+) | 1512 | WP_000414168.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| AUC49_RS05020 (AUC49_05010) | comK/comK1 | 1040878..1041447 (-) | 570 | WP_000287260.1 | competence protein ComK | Regulator |
| AUC49_RS05025 (AUC49_05015) | - | 1041657..1041875 (+) | 219 | WP_000876826.1 | IDEAL domain-containing protein | - |
| AUC49_RS05030 (AUC49_05020) | - | 1041956..1042942 (-) | 987 | WP_000668814.1 | lipoate--protein ligase | - |
| AUC49_RS05035 (AUC49_05025) | - | 1043141..1043317 (+) | 177 | WP_000214898.1 | YkvS family protein | - |
| AUC49_RS05040 (AUC49_05030) | - | 1043332..1043934 (+) | 603 | WP_001033867.1 | type II CAAX prenyl endopeptidase Rce1 family protein | - |
| AUC49_RS14925 | - | 1044249..1044311 (+) | 63 | WP_240785570.1 | putative holin-like toxin | - |
| AUC49_RS05050 (AUC49_05040) | - | 1044946..1045230 (+) | 285 | WP_000790905.1 | lactococcin 972 family bacteriocin | - |
Sequence
Protein
Download Length: 189 a.a. Molecular weight: 22624.86 Da Isoelectric Point: 9.6092
>NTDB_id=163283 AUC49_RS05020 WP_000287260.1 1040878..1041447(-) (comK/comK1) [Staphylococcus aureus strain RIVM1607]
MYSQNIYVIRKGDMVIRPAFDDDDQRHGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK
MYSQNIYVIRKGDMVIRPAFDDDDQRHGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK
Nucleotide
Download Length: 570 bp
>NTDB_id=163283 AUC49_RS05020 WP_000287260.1 1040878..1041447(-) (comK/comK1) [Staphylococcus aureus strain RIVM1607]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGACA
TGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATCAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGACA
TGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATCAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK/comK1 | Staphylococcus aureus MW2 |
99.471 |
100 |
0.995 |
| comK/comK1 | Staphylococcus aureus N315 |
99.471 |
100 |
0.995 |