Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | AT730_RS08165 | Genome accession | NZ_CP013484 |
| Coordinates | 1783206..1783820 (+) | Length | 204 a.a. |
| NCBI ID | WP_005379994.1 | Uniprot ID | - |
| Organism | Vibrio alginolyticus strain ATCC 33787 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1778206..1788820
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT730_RS08145 (AT730_08130) | - | 1778489..1779406 (-) | 918 | WP_005380000.1 | ABC transporter ATP-binding protein | - |
| AT730_RS08150 (AT730_08135) | - | 1779657..1781327 (-) | 1671 | WP_005379997.1 | SulP family inorganic anion transporter | - |
| AT730_RS08155 (AT730_08140) | can | 1781609..1782277 (+) | 669 | WP_005379996.1 | carbonate dehydratase | - |
| AT730_RS08160 (AT730_08145) | hpt | 1782356..1782886 (-) | 531 | WP_005379995.1 | hypoxanthine phosphoribosyltransferase | - |
| AT730_RS08165 (AT730_08150) | opaR | 1783206..1783820 (+) | 615 | WP_005379994.1 | transcriptional regulator OpaR | Regulator |
| AT730_RS08170 (AT730_08155) | lpdA | 1783965..1785392 (-) | 1428 | WP_005379993.1 | dihydrolipoyl dehydrogenase | - |
| AT730_RS08175 (AT730_08160) | aceF | 1785660..1787558 (-) | 1899 | WP_064368759.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23609.89 Da Isoelectric Point: 6.4042
>NTDB_id=162995 AT730_RS08165 WP_005379994.1 1783206..1783820(+) (opaR) [Vibrio alginolyticus strain ATCC 33787]
MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRAKGEAELKHLVNSYLDMLCIYNREH
MDSIAKRPRTRLSPIKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRAKGEAELKHLVNSYLDMLCIYNREH
Nucleotide
Download Length: 615 bp
>NTDB_id=162995 AT730_RS08165 WP_005379994.1 1783206..1783820(+) (opaR) [Vibrio alginolyticus strain ATCC 33787]
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCTCCAATTAAGCGTAAGCAACAGTTAATGGAAATCGCATTGGA
AGTATTTGCGCGCCGCGGCATCGGTCGTGGTGGTCACGCAGATATCGCAGAAATTGCTCAAGTTTCTGTAGCGACTGTTT
TTAACTACTTCCCTACACGCGAAGACTTGGTGGATGAAGTTCTCAATCACGTCGTACGTCAGTTCTCAAACTTCCTATCG
GATAACATAGACCTAGACTTACATGCACGTGAAAACATCGCCAATATTACTAATGCGATGATCGAGCTTGTCAGCCAAGA
TTGTCACTGGCTAAAAGTATGGTTCGAGTGGAGTGCTTCAACACGTGACGAAGTATGGCCATTGTTTGTTTCAACTAACC
GTACTAACCAGTTGCTGGTACAAAACATGTTCATTAAAGCAATTGAACGTGGCGAAGTGTGTGACCAGCACGATTCAGAA
CACTTGGCAAACCTGTTCCACGGTATTTGTTACTCACTGTTTGTCCAAGCGAACCGCGCTAAAGGTGAAGCGGAGCTGAA
ACATCTAGTGAATTCATACTTAGATATGCTTTGCATTTACAACCGTGAACACTAA
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCTCCAATTAAGCGTAAGCAACAGTTAATGGAAATCGCATTGGA
AGTATTTGCGCGCCGCGGCATCGGTCGTGGTGGTCACGCAGATATCGCAGAAATTGCTCAAGTTTCTGTAGCGACTGTTT
TTAACTACTTCCCTACACGCGAAGACTTGGTGGATGAAGTTCTCAATCACGTCGTACGTCAGTTCTCAAACTTCCTATCG
GATAACATAGACCTAGACTTACATGCACGTGAAAACATCGCCAATATTACTAATGCGATGATCGAGCTTGTCAGCCAAGA
TTGTCACTGGCTAAAAGTATGGTTCGAGTGGAGTGCTTCAACACGTGACGAAGTATGGCCATTGTTTGTTTCAACTAACC
GTACTAACCAGTTGCTGGTACAAAACATGTTCATTAAAGCAATTGAACGTGGCGAAGTGTGTGACCAGCACGATTCAGAA
CACTTGGCAAACCTGTTCCACGGTATTTGTTACTCACTGTTTGTCCAAGCGAACCGCGCTAAAGGTGAAGCGGAGCTGAA
ACATCTAGTGAATTCATACTTAGATATGCTTTGCATTTACAACCGTGAACACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
97.059 |
100 |
0.971 |
| hapR | Vibrio cholerae C6706 |
73.232 |
97.059 |
0.711 |
| hapR | Vibrio cholerae strain A1552 |
73.232 |
97.059 |
0.711 |