Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Regulator
Locus tag   A6L77_RS08585 Genome accession   NZ_CP016670
Coordinates   1659543..1660154 (-) Length   203 a.a.
NCBI ID   WP_002248273.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M25087     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1654543..1665154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L77_RS08560 (A6L77_08560) dut 1654631..1655083 (-) 453 WP_002220679.1 dUTP diphosphatase -
  A6L77_RS08565 (A6L77_08565) - 1655226..1655654 (+) 429 Protein_1590 AzlC family ABC transporter permease -
  A6L77_RS08570 (A6L77_08570) pilX 1657558..1658031 (-) 474 WP_002248276.1 PilX family type IV pilin Machinery gene
  A6L77_RS08575 (A6L77_08575) pilK 1658036..1658629 (-) 594 WP_002248275.1 pilus assembly PilX family protein Machinery gene
  A6L77_RS08580 (A6L77_08580) pilJ 1658608..1659546 (-) 939 WP_002248274.1 PilW family protein Machinery gene
  A6L77_RS08585 (A6L77_08585) pilV 1659543..1660154 (-) 612 WP_002248273.1 type IV pilus modification protein PilV Regulator
  A6L77_RS08590 (A6L77_08590) pilH 1660178..1660855 (-) 678 WP_002248272.1 GspH/FimT family pseudopilin Machinery gene
  A6L77_RS08595 (A6L77_08595) dnaB 1661010..1662416 (-) 1407 WP_002248271.1 replicative DNA helicase -
  A6L77_RS08600 (A6L77_08600) - 1662579..1663166 (+) 588 WP_002220670.1 superoxide dismutase -
  A6L77_RS08605 (A6L77_08605) - 1663738..1664247 (-) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  A6L77_RS08610 (A6L77_08610) - 1664579..1664911 (-) 333 WP_002226445.1 hypothetical protein -
  A6L77_RS14775 - 1664956..1665063 (-) 108 Protein_1600 IS5/IS1182 family transposase -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 22100.14 Da        Isoelectric Point: 4.8335

>NTDB_id=162849 A6L77_RS08585 WP_002248273.1 1659543..1660154(-) (pilV) [Neisseria meningitidis strain M25087]
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMRNHTLSAVDGDFAIDAIKTKAQLAEEQLKRFSYELKNALPDAAAIRYAVCKDSLGAAPTLSAGSTFSPNCDNKAN
GDTLIKVLWVNDSAGDSDIARTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=162849 A6L77_RS08585 WP_002248273.1 1659543..1660154(-) (pilV) [Neisseria meningitidis strain M25087]
ATGAAGAATAATGATTGCTTCCGCCTGAAAGATTCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCGTTACTGTCTGTGCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGAGAAACCATACACTATCAGCTGTGGATGGCGATTTTGCGATTGATGCCATAAAAACTAAGGCGCA
GTTGGCAGAGGAACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCCGTTACGCCG
TCTGCAAGGATTCGTTGGGTGCTGCGCCGACATTGTCCGCCGGCAGTACTTTTTCTCCAAATTGCGATAATAAGGCAAAC
GGAGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCGTACGAATCTTGAGGTGAG
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

91.304

100

0.931
  pilV/pilI Neisseria gonorrhoeae MS11

82.266

100

0.823