Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ATN06_RS06705 | Genome accession | NZ_CP013274 |
| Coordinates | 1260988..1261311 (-) | Length | 107 a.a. |
| NCBI ID | WP_060630023.1 | Uniprot ID | A0A164MRU2 |
| Organism | Bacillus thuringiensis strain CTC | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1255988..1266311
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATN06_RS06675 (ATN06_06460) | sipW | 1256455..1257024 (+) | 570 | WP_000767817.1 | signal peptidase I SipW | - |
| ATN06_RS06680 (ATN06_06465) | - | 1257087..1257674 (+) | 588 | WP_060630019.1 | CalY family protein | - |
| ATN06_RS06685 (ATN06_06470) | - | 1257776..1258072 (+) | 297 | WP_000516531.1 | transposase | - |
| ATN06_RS06690 (ATN06_06475) | - | 1258081..1258962 (+) | 882 | WP_060630020.1 | IS3 family transposase | - |
| ATN06_RS06695 (ATN06_06480) | - | 1259142..1259885 (+) | 744 | WP_060630021.1 | DUF4047 domain-containing protein | - |
| ATN06_RS06700 (ATN06_06485) | calY | 1260314..1260907 (+) | 594 | WP_060630022.1 | biofilm matrix protein CalY | - |
| ATN06_RS06705 (ATN06_06490) | sinR | 1260988..1261311 (-) | 324 | WP_060630023.1 | helix-turn-helix domain-containing protein | Regulator |
| ATN06_RS06710 (ATN06_06495) | - | 1261391..1261525 (-) | 135 | WP_060630024.1 | anti-repressor SinI family protein | - |
| ATN06_RS06715 (ATN06_06500) | inhA1 | 1261869..1264256 (+) | 2388 | WP_060630025.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| ATN06_RS06720 (ATN06_06505) | - | 1264428..1265795 (+) | 1368 | WP_060630026.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12329.16 Da Isoelectric Point: 8.5614
>NTDB_id=161277 ATN06_RS06705 WP_060630023.1 1260988..1261311(-) (sinR) [Bacillus thuringiensis strain CTC]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETAKENHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTKWKQDQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETAKENHLDSEWTQLV
KDAMSSGVSKEQFREFLEFTKWKQDQK
Nucleotide
Download Length: 324 bp
>NTDB_id=161277 ATN06_RS06705 WP_060630023.1 1260988..1261311(-) (sinR) [Bacillus thuringiensis strain CTC]
ATGATTGGAGAACGTATAAAACGCCTGCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCCGGTGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAAATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAGCAAAGGAAAATCACTTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCAGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAGATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTGCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCCGGTGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAAATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCACGATGAAACAGCAAAGGAAAATCACTTAGACTCCGAATGGACACAACTCGTT
AAAGATGCGATGAGCTCAGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAGATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |