Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   ATN06_RS06235 Genome accession   NZ_CP013274
Coordinates   1177510..1178193 (+) Length   227 a.a.
NCBI ID   WP_000350711.1    Uniprot ID   A0A2B0Y2P9
Organism   Bacillus thuringiensis strain CTC     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1172510..1183193
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ATN06_RS06210 (ATN06_05995) - 1173576..1175222 (+) 1647 WP_060629943.1 peptide ABC transporter substrate-binding protein -
  ATN06_RS06215 (ATN06_06000) - 1175251..1175454 (-) 204 WP_000559978.1 hypothetical protein -
  ATN06_RS06225 (ATN06_06010) spx 1176048..1176443 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  ATN06_RS06230 (ATN06_06015) - 1176493..1177167 (-) 675 WP_060629944.1 TerC family protein -
  ATN06_RS06235 (ATN06_06020) mecA 1177510..1178193 (+) 684 WP_000350711.1 adaptor protein MecA Regulator
  ATN06_RS06240 (ATN06_06025) - 1178266..1179810 (+) 1545 WP_060629945.1 cardiolipin synthase -
  ATN06_RS06245 (ATN06_06030) - 1179891..1181135 (+) 1245 WP_060629946.1 competence protein CoiA -
  ATN06_RS06250 (ATN06_06035) pepF 1181186..1183012 (+) 1827 WP_060629947.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26965.02 Da        Isoelectric Point: 3.9986

>NTDB_id=161275 ATN06_RS06235 WP_000350711.1 1177510..1178193(+) (mecA) [Bacillus thuringiensis strain CTC]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=161275 ATN06_RS06235 WP_000350711.1 1177510..1178193(+) (mecA) [Bacillus thuringiensis strain CTC]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGATGGACAAAAGTTAGAACTACCGATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGTATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAGCAAGCAGGAACAAACTTTAACGAAGATGGTACCTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAGGATATAAAAGATGAGCTATAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATCGTTTTAGAATACGGAGAAGAGTCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2B0Y2P9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.579

100

0.568


Multiple sequence alignment