Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ATN06_RS06145 Genome accession   NZ_CP013274
Coordinates   1159066..1159242 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain CTC     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1154066..1164242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ATN06_RS06125 (ATN06_05910) clpC 1154403..1157003 (+) 2601 WP_060629934.1 ATP-dependent chaperone ClpB Regulator
  ATN06_RS06130 (ATN06_05915) - 1157037..1157219 (-) 183 WP_001211116.1 YjzD family protein -
  ATN06_RS06135 (ATN06_05920) - 1157376..1158110 (+) 735 WP_048545174.1 hydrolase -
  ATN06_RS06140 (ATN06_05925) - 1158140..1159012 (+) 873 WP_060629935.1 NAD-dependent epimerase/dehydratase family protein -
  ATN06_RS06145 (ATN06_05930) comZ 1159066..1159242 (+) 177 WP_001986215.1 ComZ family protein Regulator
  ATN06_RS06150 (ATN06_05935) fabH 1159475..1160407 (+) 933 WP_001100541.1 beta-ketoacyl-ACP synthase III -
  ATN06_RS06155 (ATN06_05940) fabF 1160439..1161677 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  ATN06_RS06160 (ATN06_05945) - 1161784..1162572 (+) 789 WP_060629936.1 DUF2268 domain-containing protein -
  ATN06_RS06165 (ATN06_05950) - 1162715..1163461 (+) 747 WP_000966137.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=161272 ATN06_RS06145 WP_001986215.1 1159066..1159242(+) (comZ) [Bacillus thuringiensis strain CTC]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=161272 ATN06_RS06145 WP_001986215.1 1159066..1159242(+) (comZ) [Bacillus thuringiensis strain CTC]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCGCAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGAA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment