Detailed information NTG0161271

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: ATN06_RS06125
• Genome accession: NZ_CP013274
• Coordinates: 1154403..1157003 (+)
• Length: 866 a.a.
• NCBI ID: WP_060629934.1
• Uniprot ID: A0A243GL37
• Organism: Bacillus thuringiensis strain CTC
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1149403..1162003

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ATN06_RS06085 (ATN06_05870)	prsA	1150164..1151021 (-)	858	WP_060629932.1	peptidylprolyl isomerase PrsA	-
ATN06_RS06090 (ATN06_05875)	-	1151151..1151282 (-)	132	WP_060629933.1	DUF3941 domain-containing protein	-
ATN06_RS06095 (ATN06_05880)	-	1151383..1152240 (+)	858	WP_000364442.1	YitT family protein	-
ATN06_RS06100 (ATN06_05885)	-	1152266..1152463 (-)	198	WP_000527393.1	DUF3813 domain-containing protein	-
ATN06_RS06105 (ATN06_05890)	-	1152464..1152604 (-)	141	WP_000516816.1	hypothetical protein	-
ATN06_RS06110 (ATN06_05895)	-	1152710..1153519 (-)	810	WP_033691175.1	Cof-type HAD-IIB family hydrolase	-
ATN06_RS06120 (ATN06_05905)	-	1154012..1154191 (+)	180	WP_000531418.1	YjzC family protein	-
ATN06_RS06125 (ATN06_05910)	clpC	1154403..1157003 (+)	2601	WP_060629934.1	ATP-dependent chaperone ClpB	Regulator
ATN06_RS06130 (ATN06_05915)	-	1157037..1157219 (-)	183	WP_001211116.1	YjzD family protein	-
ATN06_RS06135 (ATN06_05920)	-	1157376..1158110 (+)	735	WP_048545174.1	hydrolase	-
ATN06_RS06140 (ATN06_05925)	-	1158140..1159012 (+)	873	WP_060629935.1	NAD-dependent epimerase/dehydratase family protein	-
ATN06_RS06145 (ATN06_05930)	comZ	1159066..1159242 (+)	177	WP_001986215.1	ComZ family protein	Regulator
ATN06_RS06150 (ATN06_05935)	fabH	1159475..1160407 (+)	933	WP_001100541.1	beta-ketoacyl-ACP synthase III	-
ATN06_RS06155 (ATN06_05940)	fabF	1160439..1161677 (+)	1239	WP_000412652.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97471.48 Da
• Isoelectric Point: 5.1590

>NTDB_id=161271 ATN06_RS06125 WP_060629934.1 1154403..1157003(+) (clpC) [Bacillus thuringiensis strain CTC]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
AGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTANEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVRVK

Nucleotide

• Length: 2601 bp

>NTDB_id=161271 ATN06_RS06125 WP_060629934.1 1154403..1157003(+) (clpC) [Bacillus thuringiensis strain CTC]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCATCA
AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAACAAGGCGCTGAAAGTTTAATTAAGAAAAAGCCTTCTGTAACGGGAAGTGGTGCAGAA
GCAGGCAAATTATATATAACAGGTGCTCTGCAACAACTACTTGTAAGAGCGGGAAAAGAAGCAGAGAAATTACAAGATGA
TTATATTTCAGTCGAGCATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATAAACCAATTATTCACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACA
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTGGCAGAAGTGAGAGCGGGGAAAATTGATCCTGTTATCGGGCGTGA
TAGTGAAATTCGCCGCGTCATTCGCATTCTTTCACGTAAAACGAAAAACAACCCGGTTTTAATTGGTGAGCCAGGTGTTG
GTAAAACAGCAATTGTTGAAGGATTAGCACAGCGTATTGTGAAAAAGGACGTACCTGAAGGTTTAAAAGATAGAACAATT
TTTGCGTTAGATATGAGTGCACTTGTAGCTGGCGCGAAATTCCGTGGTGAATTTGAAGAACGTCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGCCGCATTTTATTATTCATTGATGAACTGCACACAATCGTCGGCGCTGGTAAAACAGAAG
GTGCGATGGACGCAGGGAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACAACACTAGAT
GAATATCGCAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACCGTTGA
AGATACAATCTCCATTTTACGTGGTTTAAAAGAGCGTTTTGAAATTTACCATGGTGTAAATATTCATGACCGCGCGATTG
TAGCAGCATCAGTTTTATCAGATCGATATATTTCGGATCGTTTCTTACCAGATAAAGCAATTGATCTTGTTGATGAAGCA
TGTGCAACGATTCGAACAGAGATTGATTCTATGCCGACAGAATTAGATGAAGTAACACGCCGCATTATGCAGCTTGAAAT
TGAAGAAGCAGCTCTTGGAAAAGAGAAGGACTTTGGTAGCCAAGAACGTCTAAAAACGTTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGGAATTACGATTTAAATAAAGCAGCGGAACTTCGTCACGG
GAAAATTCCTGCGATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCACATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTCGCGAAACTCGTTGAAGGG
GAACGCGAGAAATTACTACGCCTAGAGCAAATTTTATCAGAGCGTGTCATCGGACAAGAAGAAGCGGTAAGCCTAGTATC
AGATGCAGTTCTTCGTGCTCGCGCTGGTATTAAAGATCCGAACCGTCCGATTGGTTCCTTCATCTTCTTAGGACCAACAG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTTTATTCGATAGTGAAGAGCAAATGATTCGTATTGATATG
TCTGAGTATATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTTGGATATGAAGAGGGCGGTCA
ATTAACAGAAGCAGTAAGACGTAAACCGTATTCTGTTATTTTGTTAGACGAAATCGAAAAAGCGCATCCAGAAGTATTCA
ATATTTTATTACAAATGTTAGATGACGGTCGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAATACAGTTATT
ATTATGACGTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGAAGAAGATGGCTCCATTAAAGAAGAATCAAGAGA
GCTTGTAATGGGACAATTAAGAGGACATTTCCGACCAGAGTTTTTAAACCGTGTCGATGAAATTATTTTATTCAAACCTC
TTACAGCGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGTCGTTTAGCTGATCGTCACATTACG
GTAGAATTAACAGATGCTGCGAAAGAGTTTGTTGTAGAAGCTGGATTTGATCCAATGTACGGAGCTCGTCCATTAAAACG
ATATGTACAACGTCAAGTGGAAACGAAACTAGCACGAGAATTAATTGCAGGAACGATTACTGACAATAGTCACGTAGTTG
TTGATGTTGAAAATAACGAGTTAGTCGTGCGTGTGAAATAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• AAA lid domain (AAA_lid_9) (345-447)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

3D structure

• AlphaFold DB: A0A243GL37

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.548	100	0.482
clpC	Lactococcus lactis subsp. cremoris KW2	47.199	82.448	0.389