Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ATN06_RS00625 | Genome accession | NZ_CP013274 |
| Coordinates | 75557..77992 (+) | Length | 811 a.a. |
| NCBI ID | WP_060629199.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis strain CTC | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 70557..82992
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATN06_RS00610 (ATN06_00395) | ctsR | 73282..73743 (+) | 462 | WP_060629196.1 | transcriptional regulator CtsR | - |
| ATN06_RS00615 (ATN06_00400) | - | 73917..74465 (+) | 549 | WP_060629197.1 | UvrB/UvrC motif-containing protein | - |
| ATN06_RS00620 (ATN06_00405) | - | 74470..75534 (+) | 1065 | WP_060629198.1 | protein arginine kinase | - |
| ATN06_RS00625 (ATN06_00410) | clpC | 75557..77992 (+) | 2436 | WP_060629199.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| ATN06_RS00630 (ATN06_00415) | radA | 78089..79465 (+) | 1377 | WP_060629200.1 | DNA repair protein RadA | Machinery gene |
| ATN06_RS00635 (ATN06_00420) | disA | 79469..80542 (+) | 1074 | WP_060629201.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ATN06_RS00640 (ATN06_00425) | - | 80703..81812 (+) | 1110 | WP_060629202.1 | PIN/TRAM domain-containing protein | - |
| ATN06_RS00645 (ATN06_00430) | ispD | 81829..82509 (+) | 681 | WP_060629203.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90516.31 Da Isoelectric Point: 6.4054
>NTDB_id=161263 ATN06_RS00625 WP_060629199.1 75557..77992(+) (clpC) [Bacillus thuringiensis strain CTC]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEKQGQENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEKQGQENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGADALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=161263 ATN06_RS00625 WP_060629199.1 75557..77992(+) (clpC) [Bacillus thuringiensis strain CTC]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGGGAAGGAATTGCAGCAAAAGCGTTGATTGCTCTAG
GATTAAGTCCAGAGAAAGTTCAAAAAGAAGTAGAAGCGTTAATTGGACGCGGAACAGAAGCTTCTCAAACGGTACATTAT
ACACCGCGTGCTAAAAAGGTTATTGAGTTGTCTATGGATGAAGCTCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATCTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGTGTTTTAAATAACTTAGGTGTTAGCCTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGCAATGAAGCAAGCTCAGGTCACCAAGGTGGTTCTTCAACAAATGCAAAT
ACACCAACACTGGATAGCTTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGACCCTGTTATTGGGCGTGG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGAGAGCCTGGTGTAG
GTAAAACGGCGATTGCAGAAGGATTAGCACAACAAATCGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTGGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGATCGTTTGAAGAAAGTAATGGA
TGAAATCCGTCAGGCAGGAAATATTATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CCATTGATGCATCGAACATTTTAAAACCATCTTTAGCTCGCGGGGAGTTACAATGTATTGGGGCGACAACGTTAGATGAA
TATCGCAAATATATTGAAAAAGACGCGGCTTTAGAGAGACGTTTCCAACCAATTCACGTTGATGAGCCAAGTTTAGACGA
ATCAACTCAAATCTTGAAAGGTTTACGTGATCGCTATGAGGCACATCACCGCGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGATCGTTATATTACAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCTAAGGTTCGCTTACGCTCTTATACAACACCACCAAATTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGCTTGCGTGAGAAGT
TAGAAGATACAAAGCGTCAGTGGAAAGAGAAACAAGGACAAGAAAACTCAGAAGTAACAGTAGAAGATATTGCAAATGTC
GTATCTACATGGACGCGTATTCCAGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCACGATCGTGTTATTGGTCAAGATGAAGCAGTAGTAGCTGTAGCGAAAGCTGTTCGTCGTGCTAGAGCAGGATTGAAAG
ATCCGAAACGTCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAGACTGAGCTAGCAAGAGCGTTAGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATCGATATGTCTGAGTACATGGAGAAGCATTCTACCTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACGGAAAAGGTTCGCCGTAAGCCATATTCAG
TTGTTCTATTAGATGAAGTAGAGAAAGCTCATCCGGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGCTTA
ACGGATTCTAAAGGGCGTACGGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGACGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTGAATCAGTTAGTGAATCGCTTAAAAGAGCAAGAGATTGAATTGCATTTAACAGAAGG
AGCGATTTCAGCCATTGCTGATAAAGGATTTGACCGAGAGTACGGTGCTCGCCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGAGAA
TCATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGGGAAGGAATTGCAGCAAAAGCGTTGATTGCTCTAG
GATTAAGTCCAGAGAAAGTTCAAAAAGAAGTAGAAGCGTTAATTGGACGCGGAACAGAAGCTTCTCAAACGGTACATTAT
ACACCGCGTGCTAAAAAGGTTATTGAGTTGTCTATGGATGAAGCTCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATCTTACTTGGTTTAATCCGTGAAGGTGAAGGTGTAGCAGCACGTGTTTTAAATAACTTAGGTGTTAGCCTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGCAATGAAGCAAGCTCAGGTCACCAAGGTGGTTCTTCAACAAATGCAAAT
ACACCAACACTGGATAGCTTAGCACGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGACCCTGTTATTGGGCGTGG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGAGAGCCTGGTGTAG
GTAAAACGGCGATTGCAGAAGGATTAGCACAACAAATCGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTGGTAGCTGGAACGAAATATCGTGGTGAATTTGAAGATCGTTTGAAGAAAGTAATGGA
TGAAATCCGTCAGGCAGGAAATATTATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CCATTGATGCATCGAACATTTTAAAACCATCTTTAGCTCGCGGGGAGTTACAATGTATTGGGGCGACAACGTTAGATGAA
TATCGCAAATATATTGAAAAAGACGCGGCTTTAGAGAGACGTTTCCAACCAATTCACGTTGATGAGCCAAGTTTAGACGA
ATCAACTCAAATCTTGAAAGGTTTACGTGATCGCTATGAGGCACATCACCGCGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGATCGTTATATTACAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCTAAGGTTCGCTTACGCTCTTATACAACACCACCAAATTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAATTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGCTTGCGTGAGAAGT
TAGAAGATACAAAGCGTCAGTGGAAAGAGAAACAAGGACAAGAAAACTCAGAAGTAACAGTAGAAGATATTGCAAATGTC
GTATCTACATGGACGCGTATTCCAGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCACGATCGTGTTATTGGTCAAGATGAAGCAGTAGTAGCTGTAGCGAAAGCTGTTCGTCGTGCTAGAGCAGGATTGAAAG
ATCCGAAACGTCCGATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAGACTGAGCTAGCAAGAGCGTTAGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATCGATATGTCTGAGTACATGGAGAAGCATTCTACCTCTCGTTT
AGTTGGATCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACGGAAAAGGTTCGCCGTAAGCCATATTCAG
TTGTTCTATTAGATGAAGTAGAGAAAGCTCATCCGGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGCTTA
ACGGATTCTAAAGGGCGTACGGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGACGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAAGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTGAATCAGTTAGTGAATCGCTTAAAAGAGCAAGAGATTGAATTGCATTTAACAGAAGG
AGCGATTTCAGCCATTGCTGATAAAGGATTTGACCGAGAGTACGGTGCTCGCCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGAGAA
TCATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
86.173 |
99.877 |
0.861 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.5 |
98.644 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
45.969 |
100 |
0.471 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.476 |
100 |
0.465 |
| clpC | Streptococcus mutans UA159 |
44.762 |
100 |
0.464 |
| clpC | Streptococcus pneumoniae D39 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae Rx1 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.375 |
98.644 |
0.457 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.396 |
79.778 |
0.418 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.396 |
79.778 |
0.418 |
| clpE | Streptococcus pneumoniae Rx1 |
52.396 |
79.778 |
0.418 |
| clpE | Streptococcus pneumoniae D39 |
52.396 |
79.778 |
0.418 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.893 |
78.175 |
0.406 |