Detailed information NTG0160991

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: APQ13_RS06600
• Genome accession: NZ_CP013237
• Coordinates: 1378506..1379558 (-)
• Length: 350 a.a.
• NCBI ID: WP_002289581.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain NG8 isolate Dental Plaque
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1373506..1384558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APQ13_RS06580 (APQ13_06565)	ptcA	1373901..1374920 (-)	1020	WP_002282737.1	putrescine carbamoyltransferase	-
APQ13_RS06585 (APQ13_06570)	-	1375159..1376124 (+)	966	WP_002263993.1	helix-turn-helix transcriptional regulator	-
APQ13_RS06590 (APQ13_06575)	-	1376341..1376943 (-)	603	WP_002273611.1	nitroreductase family protein	-
APQ13_RS06595 (APQ13_06580)	amiF	1377587..1378513 (-)	927	WP_002267002.1	ABC transporter ATP-binding protein	Regulator
APQ13_RS06600 (APQ13_06585)	oppD	1378506..1379558 (-)	1053	WP_002289581.1	ABC transporter ATP-binding protein	Regulator
APQ13_RS06605 (APQ13_06590)	-	1379568..1380599 (-)	1032	WP_002263989.1	ABC transporter permease	-
APQ13_RS06610 (APQ13_06595)	-	1380610..1381524 (-)	915	WP_002262739.1	ABC transporter permease	-
APQ13_RS06615 (APQ13_06600)	-	1381630..1383279 (-)	1650	WP_002265823.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 39102.62 Da
• Isoelectric Point: 5.7541

>NTDB_id=160991 APQ13_RS06600 WP_002289581.1 1378506..1379558(-) (oppD) [Streptococcus mutans strain NG8 isolate Dental Plaque]
MGKEKILQVNNLHVNFHTYAGEVKAIRDVSFYLEKGETLAIVGESGSGKSVTTRTLMGLSAKNAEIFGDIEFKGRNLNDL
KEEDWVHIRGNDISMIFQDPMTSLDPTMRIGLQIAEPIIKHEKVTKKEALKRALDMMEKVGIPNAQEHINDYPHQWSGGM
RQRAVIAIALATNPEILIADEPTTALDVTIQAQILHLMKEIQKNTDSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTNTASGSLHSIPGTPPDLLQPPQGDAFAPRNEFALDIDLKEEPPFFKVSDSHYAATWLL
DDRAPKITPPERILQRWGKWKSLQGEKHND

Nucleotide

• Length: 1053 bp

>NTDB_id=160991 APQ13_RS06600 WP_002289581.1 1378506..1379558(-) (oppD) [Streptococcus mutans strain NG8 isolate Dental Plaque]
ATGGGTAAGGAAAAAATTTTACAAGTCAATAACCTCCATGTCAATTTTCATACCTATGCAGGTGAAGTAAAAGCTATTCG
CGATGTTAGTTTTTATTTAGAAAAAGGGGAAACGCTGGCTATTGTTGGCGAATCTGGTTCTGGAAAGTCGGTAACCACAC
GAACTTTAATGGGGTTGTCAGCAAAGAATGCTGAGATTTTCGGAGATATTGAGTTTAAGGGACGCAATCTAAATGATTTG
AAGGAAGAAGACTGGGTTCATATTCGCGGAAATGATATTTCCATGATTTTCCAAGATCCTATGACAAGTTTGGATCCAAC
CATGCGTATTGGCCTTCAAATTGCTGAACCTATTATCAAGCATGAAAAAGTAACTAAAAAAGAAGCTCTCAAGCGGGCTC
TTGACATGATGGAAAAGGTTGGTATTCCCAATGCGCAAGAACACATCAACGATTATCCTCATCAGTGGTCAGGCGGTATG
CGCCAGCGCGCTGTCATAGCTATTGCTTTGGCAACTAATCCTGAAATCCTTATTGCAGATGAACCAACGACGGCTCTTGA
TGTTACCATTCAAGCACAAATTCTTCATTTAATGAAAGAAATCCAAAAGAATACTGACTCTTCCATTATCTTTATCACTC
ATGATTTGGGTGTCGTTGCAGGTATGGCAGACCGTGTTGCTGTTATGTATGCAGGCAAGATTGTGGAATATGGTACAGTA
GATGAGGTTTTCTACAACCCACAGCATCCCTACACTTGGGGGCTTCTCAATTCGATGCCTACAACTAATACAGCTTCAGG
CAGTTTGCATTCAATTCCCGGAACACCGCCTGACTTGTTGCAGCCCCCTCAAGGAGATGCTTTTGCTCCAAGAAATGAAT
TCGCTCTTGATATTGATCTTAAGGAGGAGCCGCCATTTTTTAAAGTTAGTGATTCACATTATGCTGCTACTTGGCTGTTA
GATGATCGTGCTCCTAAGATTACTCCGCCGGAAAGAATTTTGCAGCGTTGGGGAAAATGGAAGAGCTTACAGGGAGAAAA
GCATAATGACTGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	98.857	100	0.989
amiE	Streptococcus salivarius strain HSISS4	54.885	99.429	0.546
amiE	Streptococcus thermophilus LMG 18311	55.072	98.571	0.543
amiE	Streptococcus thermophilus LMD-9	55.072	98.571	0.543