Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   APQ13_RS00980 Genome accession   NZ_CP013237
Coordinates   181688..182491 (+) Length   267 a.a.
NCBI ID   WP_002262928.1    Uniprot ID   A0AAX1K323
Organism   Streptococcus mutans strain NG8 isolate Dental Plaque     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 176688..187491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  APQ13_RS00955 (APQ13_00955) - 176973..177677 (-) 705 WP_002262933.1 amino acid ABC transporter permease -
  APQ13_RS00960 (APQ13_00960) - 177695..178507 (-) 813 WP_002262932.1 transporter substrate-binding domain-containing protein -
  APQ13_RS00965 (APQ13_00965) - 178504..179286 (-) 783 WP_002266943.1 amino acid ABC transporter ATP-binding protein -
  APQ13_RS00970 (APQ13_00970) vicR 179639..180346 (+) 708 WP_002262930.1 response regulator YycF Regulator
  APQ13_RS00975 (APQ13_00975) vicK 180339..181691 (+) 1353 WP_002264821.1 cell wall metabolism sensor histidine kinase VicK Regulator
  APQ13_RS00980 (APQ13_00980) vicX 181688..182491 (+) 804 WP_002262928.1 MBL fold metallo-hydrolase Regulator
  APQ13_RS00985 (APQ13_00985) rnc 182598..183293 (+) 696 WP_002266141.1 ribonuclease III -
  APQ13_RS00990 (APQ13_00990) smc 183293..186829 (+) 3537 WP_002351162.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29693.77 Da        Isoelectric Point: 6.1184

>NTDB_id=160962 APQ13_RS00980 WP_002262928.1 181688..182491(+) (vicX) [Streptococcus mutans strain NG8 isolate Dental Plaque]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAATWQAMDGMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGIYPWSLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=160962 APQ13_RS00980 WP_002262928.1 181688..182491(+) (vicX) [Streptococcus mutans strain NG8 isolate Dental Plaque]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGACGCAGGCCTCTCAGGTAAGAAAATTAGTCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGCAACATGGCAAGCTATGGATGGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TCTGGGGAAAACCATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTCAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGTTTTGTCATATTGACGGATACAGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTATCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGGTTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

100

100

1

Multiple sequence alignment