Detailed information NTG0160753

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: BC375_RS09315
• Genome accession: NZ_CP016610
• Coordinates: 1898357..1900834 (-)
• Length: 825 a.a.
• NCBI ID: WP_046419125.1
• Uniprot ID: -
• Organism: Xylella fastidiosa strain Salento-2
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1893357..1905834

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BC375_RS09295 (BC375_08635)	lpxK	1894486..1895505 (-)	1020	WP_046418988.1	tetraacyldisaccharide 4'-kinase	-
BC375_RS09300 (BC375_08640)	msbA	1895502..1897250 (-)	1749	WP_046418985.1	lipid A export permease/ATP-binding protein MsbA	-
BC375_RS09305 (BC375_08645)	-	1897268..1897705 (-)	438	WP_004089267.1	biopolymer transporter ExbD	-
BC375_RS09310 (BC375_08650)	exbB	1897710..1898372 (-)	663	WP_046418980.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
BC375_RS09315 (BC375_08655)	comA	1898357..1900834 (-)	2478	WP_046419125.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
BC375_RS09320 (BC375_08660)	lolD	1901183..1901905 (-)	723	WP_023907913.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
BC375_RS09325 (BC375_08665)	-	1901898..1903139 (-)	1242	WP_046418978.1	lipoprotein-releasing ABC transporter permease subunit	-
BC375_RS09330 (BC375_08670)	-	1903165..1903545 (-)	381	WP_046418975.1	hypothetical protein	-
BC375_RS09335 (BC375_08675)	-	1903568..1903816 (-)	249	WP_046418973.1	succinate dehydrogenase assembly factor 2	-
BC375_RS09340 (BC375_08680)	-	1903937..1904722 (-)	786	WP_046418969.1	succinate dehydrogenase iron-sulfur subunit	-

Sequence

Protein

• Length: 825 a.a.
• Molecular weight: 90744.67 Da
• Isoelectric Point: 9.0670

>NTDB_id=160753 BC375_RS09315 WP_046419125.1 1898357..1900834(-) (comA) [Xylella fastidiosa strain Salento-2]
MDDMKPEQRHVLQRCWVDVLSVIRHATCLRYLGFPALLPSAVALLLGCLAALTLPRLPPVWVLWIFLFAGVMLAVVVRRV
AWCGVVLFGFANCCLHGQFGLRHQLSFALEGRDLVLRGRIVSLPVPETRRTRFLLRVDTDQDQEPALRGRLLQLSWYDEN
KVVAPGPRNALHAGSVWQLHVRLRAPHSLLNPGGFDSERYALAQGIVATGYVRAPTMAREVAAATGINAWRERMSVRIAD
AVLSEASVYLRALALGDTRGLSQQDWEVLRATGLTHLIAISGFHVGMVAGACALLVSLLWRLFPHLAWRCPRPLAMALIA
VPAAAGYTVLAGASLPTVRTALMIGIVALARLTRRRAMPGHVLGLALLVVLVWDPLAILSAGFWLSFAGVAWLLWCMQDG
HAAPWRGFLSAQGVATLGLLPFTVALFGQVSFVGPFANLIAIPLWTFVVVPLALLGTALEALVPGWGSPMWRLGGTCFEW
SWQLFEYLAQTDFALWWLPESDGVALWLALLGAFWLLLPRGTPGKWLALLLWLPLLWPERERPRPGEFEMQMLDVGQGLS
IVVRTSGHTLLYDAGPAVNDGFDAGERVVVPALRASGIRRLDALVASHADSDHVGGLPAVLKAYPVDISYAPPDAPLDVE
RRCSAGDSWLWDGVQFRFLHPAPHSTYLGNESSCVLRIDTRWGSALLTGDIGKVVERGLLSQDRESVRADVVVVPHHGSA
GSSSLGFVRAVNARLALVSSGDGNRFGHPRCSVVESWSETADVLLTAHSGAVRIWVGQQGLQLRERRVWRRRFWDAVERR
RSAAILSATEDVSKERRRNETCWNW

Nucleotide

• Length: 2478 bp

>NTDB_id=160753 BC375_RS09315 WP_046419125.1 1898357..1900834(-) (comA) [Xylella fastidiosa strain Salento-2]
ATGGACGATATGAAACCCGAGCAGCGACACGTGTTGCAGCGATGTTGGGTTGACGTGTTAAGTGTGATCCGGCACGCAAC
CTGCTTGCGTTACCTCGGGTTTCCGGCGTTGTTGCCGAGTGCTGTTGCGTTGCTGTTGGGTTGTCTTGCTGCACTCACCT
TGCCGCGATTACCGCCCGTATGGGTGTTGTGGATTTTTCTGTTTGCCGGAGTAATGCTCGCTGTTGTCGTGCGCCGTGTT
GCTTGGTGCGGTGTGGTGTTGTTTGGTTTTGCTAACTGTTGCTTGCATGGTCAGTTTGGTTTGCGACATCAATTGTCGTT
CGCGTTGGAGGGCCGCGATCTGGTGTTACGTGGTCGGATCGTTTCTTTGCCGGTTCCAGAGACCAGGCGCACACGTTTCT
TGTTGCGTGTGGATACCGATCAAGATCAGGAACCAGCGCTGCGTGGTCGACTGCTGCAGTTATCCTGGTATGACGAGAAT
AAGGTGGTAGCGCCGGGGCCACGCAATGCATTGCATGCTGGATCTGTATGGCAGTTGCACGTGCGTCTGCGTGCGCCGCA
CAGTTTGCTGAATCCCGGAGGTTTCGACAGCGAGCGTTATGCCCTAGCCCAGGGGATTGTTGCGACCGGTTACGTACGTG
CGCCGACGATGGCACGTGAGGTGGCGGCAGCCACTGGCATCAATGCTTGGCGGGAACGGATGTCTGTGCGTATTGCTGAT
GCGGTGTTGTCGGAAGCATCGGTGTATTTACGTGCGTTGGCGTTGGGTGATACCCGGGGCTTGTCCCAACAGGATTGGGA
AGTATTGCGCGCTACAGGGCTGACGCATTTGATTGCGATCTCGGGGTTCCATGTCGGTATGGTCGCTGGTGCCTGTGCGT
TGCTTGTGTCGTTGCTGTGGCGGCTTTTCCCACATTTGGCGTGGCGTTGTCCGCGACCACTCGCCATGGCACTCATTGCG
GTACCGGCCGCCGCCGGCTACACCGTCCTGGCTGGGGCGTCACTGCCCACAGTCAGAACCGCTTTGATGATCGGCATCGT
CGCATTGGCGCGCCTCACTCGGCGTCGTGCCATGCCGGGGCATGTCCTGGGGCTTGCCTTGCTGGTCGTACTGGTTTGGG
ATCCATTAGCCATTCTTAGTGCTGGCTTCTGGCTCAGCTTTGCCGGTGTCGCTTGGTTACTGTGGTGTATGCAAGACGGT
CATGCCGCGCCTTGGCGTGGCTTCTTATCGGCACAAGGTGTTGCAACCCTTGGGTTATTACCATTCACCGTGGCTTTATT
TGGTCAGGTTTCGTTTGTTGGGCCTTTCGCTAACTTGATTGCGATTCCGTTATGGACCTTTGTCGTTGTACCGCTGGCGT
TGTTAGGGACTGCGCTGGAAGCGTTAGTGCCAGGGTGGGGTAGCCCCATGTGGCGTTTGGGGGGAACTTGTTTCGAATGG
AGTTGGCAGCTATTCGAATACTTGGCACAGACTGATTTCGCATTGTGGTGGTTGCCGGAATCTGATGGTGTTGCATTGTG
GTTGGCCTTGCTGGGAGCGTTTTGGTTGCTGTTACCACGCGGTACGCCTGGTAAGTGGCTGGCGCTGTTGCTGTGGTTGC
CTTTGTTGTGGCCTGAGCGTGAGCGTCCCCGCCCCGGGGAGTTTGAGATGCAGATGCTGGACGTGGGGCAAGGACTGTCG
ATTGTGGTGCGTACCTCAGGCCATACGTTGTTGTACGACGCAGGTCCAGCAGTGAATGATGGTTTCGATGCCGGTGAGCG
TGTTGTGGTGCCGGCATTACGTGCCAGTGGCATCCGTCGCTTGGATGCATTGGTGGCTAGTCATGCTGATAGTGATCACG
TCGGAGGTTTGCCCGCGGTCCTGAAGGCTTATCCGGTTGATATCAGCTACGCTCCGCCGGATGCTCCACTCGACGTGGAG
CGCCGTTGCAGTGCTGGGGACAGTTGGCTGTGGGATGGAGTCCAGTTTCGTTTCTTACATCCTGCACCGCATTCGACTTA
TTTAGGTAACGAGTCCAGTTGTGTATTGCGTATCGACACGCGCTGGGGCAGTGCTTTGTTGACGGGTGACATCGGCAAAG
TGGTCGAACGTGGTTTATTGAGTCAGGATCGTGAGAGTGTACGTGCCGATGTGGTGGTCGTACCGCATCATGGGAGCGCC
GGTTCTTCCTCGCTTGGGTTTGTCCGTGCGGTTAATGCGCGGTTAGCTTTGGTATCCAGTGGTGATGGTAACCGCTTCGG
TCATCCGCGCTGTTCGGTGGTGGAGAGCTGGAGTGAAACGGCAGATGTGTTGCTTACTGCGCATAGCGGCGCAGTACGGA
TTTGGGTTGGACAGCAGGGTCTGCAGTTACGTGAACGCCGTGTTTGGCGTCGTCGATTCTGGGATGCGGTCGAACGTCGC
CGATCCGCTGCTATCCTATCCGCCACTGAAGATGTATCCAAAGAGCGTCGGAGAAACGAGACATGCTGGAACTGGTAA

Domains

Predicted by InterProScan.

• Domain of unknown function (DUF4131) (DUF4131) (58-216)

• Metallo-beta-lactamase superfamily (Lactamase_B) (554-722)

• Competence protein (Competence) (253-520)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Ralstonia pseudosolanacearum GMI1000	37.153	100	0.373