Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   ASO14_RS06290 Genome accession   NZ_CP013217
Coordinates   1211245..1212939 (+) Length   564 a.a.
NCBI ID   WP_068452990.1    Uniprot ID   A0A0X1RXM5
Organism   Kurthia sp. 11kri321     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1206245..1217939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASO14_RS06265 (ASO14_1272) - 1206628..1206861 (+) 234 WP_068452980.1 exodeoxyribonuclease VII small subunit -
  ASO14_RS06270 (ASO14_1273) - 1206865..1207749 (+) 885 WP_068452982.1 polyprenyl synthetase family protein -
  ASO14_RS06275 (ASO14_1274) dxs 1207848..1209752 (+) 1905 WP_068457317.1 1-deoxy-D-xylulose-5-phosphate synthase -
  ASO14_RS06280 (ASO14_1275) - 1209752..1210573 (+) 822 WP_068452984.1 TlyA family RNA methyltransferase -
  ASO14_RS06285 (ASO14_1276) argR 1210757..1211206 (+) 450 WP_068452987.1 transcriptional regulator ArgR -
  ASO14_RS06290 (ASO14_1277) recN 1211245..1212939 (+) 1695 WP_068452990.1 DNA repair protein RecN Machinery gene
  ASO14_RS06295 (ASO14_1278) - 1213177..1213905 (+) 729 WP_068452993.1 sporulation initiation factor Spo0A C-terminal domain-containing protein -
  ASO14_RS06300 (ASO14_1279) - 1213991..1214209 (+) 219 WP_068452996.1 hypothetical protein -
  ASO14_RS06305 (ASO14_1280) - 1214525..1216093 (+) 1569 WP_068452998.1 FapA family protein -
  ASO14_RS06310 (ASO14_1281) - 1216086..1216814 (+) 729 WP_068453000.1 glycerophosphodiester phosphodiesterase family protein -

Sequence

Protein


Download         Length: 564 a.a.        Molecular weight: 63867.61 Da        Isoelectric Point: 4.5851

>NTDB_id=160752 ASO14_RS06290 WP_068452990.1 1211245..1212939(+) (recN) [Kurthia sp. 11kri321]
MLKELSIKNFAIIDALTVEFQEGLTVLTGETGAGKSIIIDAVQLLAGGRGSQEFIRHGAKKAELEGLFTLPEEPHPAYDK
CKELGIEVDEGVIILRRDLNDTGKSVCRVNGKMMPLNMLREVGSTLIDIHGQHESQELMDDKQHIYLLDQFAGDAIIGEK
ERYTSLYEQYRTLKSELAALSLGEQQIAQKIDLYSFQIKEIDACKFKENEENELMEERRRLNNFHKIFEGSSHAHEAILG
ESKGLDWIGQAMSDLEDVANVDEQFKEQSMAVSDAFYVLQEAAFSLKNILDEMEFDPERLNEVEQRLALIQNMKRKYGHS
LADILAYRDQIGKELETLENSDENIQKNEKRLKDLEKQLAEQAEKLTIIRKEYGVQLAEKIMTQLQELYMERATLIVQIT
PSHTFDAMGSDEVVFYISTNVGEPPKPLTKIASGGELSRIMIALKTIFSSTMGITSIIFDEVDTGVSGRVAQAIADKISL
ISVNSQVLCISHLPQVAAMADHHYYIQKQEEDNRTFTSLCELVEDDRIDEISRMMSGEVVTEKTFQHAKELVEIAEEHKQ
RRII

Nucleotide


Download         Length: 1695 bp        

>NTDB_id=160752 ASO14_RS06290 WP_068452990.1 1211245..1212939(+) (recN) [Kurthia sp. 11kri321]
GTGTTAAAAGAATTATCCATAAAGAATTTTGCCATCATTGATGCATTAACCGTCGAATTTCAAGAAGGATTAACTGTATT
AACGGGCGAAACAGGTGCGGGTAAGTCAATCATCATTGATGCGGTACAACTTTTAGCAGGAGGTAGAGGTTCTCAAGAGT
TTATTCGCCATGGTGCTAAAAAGGCTGAACTTGAGGGCCTTTTTACGTTGCCTGAAGAACCGCATCCTGCTTATGATAAG
TGTAAAGAATTAGGAATCGAAGTTGATGAAGGTGTGATTATTTTACGCCGAGATTTAAATGATACAGGAAAGAGTGTTTG
TCGTGTTAACGGTAAAATGATGCCACTGAATATGTTACGTGAAGTGGGCTCGACATTGATTGATATTCATGGGCAGCATG
AATCACAAGAATTAATGGACGATAAACAGCATATCTATTTACTCGATCAATTTGCGGGTGATGCGATAATCGGAGAAAAA
GAGCGATATACATCGCTATATGAACAATATCGTACATTGAAAAGCGAATTAGCAGCACTATCACTTGGTGAACAGCAAAT
CGCTCAAAAAATTGATTTATACTCATTCCAAATTAAAGAGATTGATGCATGTAAGTTTAAAGAGAATGAAGAAAATGAAT
TGATGGAAGAACGTCGTCGTTTAAATAACTTCCATAAAATCTTTGAAGGTAGTTCTCACGCACATGAAGCGATTCTTGGT
GAATCTAAAGGGCTTGATTGGATTGGTCAAGCGATGTCTGATTTAGAAGATGTTGCGAATGTAGATGAACAGTTCAAAGA
ACAATCTATGGCCGTATCAGATGCGTTCTATGTTTTGCAGGAAGCTGCTTTTTCATTAAAGAATATTTTAGATGAGATGG
AGTTTGACCCAGAAAGATTAAATGAAGTAGAGCAACGCCTCGCACTCATTCAAAATATGAAGCGAAAATATGGCCATAGT
TTAGCGGATATTTTAGCGTATCGCGATCAAATTGGTAAAGAATTAGAGACGCTTGAAAATAGCGACGAGAATATTCAAAA
GAATGAAAAACGCTTAAAAGACTTAGAAAAACAACTAGCTGAACAAGCAGAAAAGCTAACAATTATCCGTAAAGAATATG
GTGTTCAATTAGCTGAGAAGATTATGACGCAATTACAAGAGTTGTATATGGAACGTGCAACACTGATTGTACAAATTACA
CCGTCACATACATTTGATGCGATGGGTAGCGATGAAGTTGTCTTCTATATTTCAACGAATGTAGGGGAGCCACCAAAGCC
ACTGACGAAAATTGCGTCTGGTGGTGAGCTATCGCGTATTATGATTGCTCTTAAAACCATCTTTTCATCTACAATGGGAA
TTACGTCCATCATTTTTGATGAGGTTGATACAGGCGTAAGTGGTCGTGTAGCGCAAGCTATTGCGGATAAAATTTCACTA
ATCTCTGTAAATTCACAAGTGCTTTGTATTTCGCATTTACCACAAGTAGCGGCGATGGCTGACCATCATTATTATATTCA
AAAGCAAGAAGAAGATAATCGTACGTTCACATCGTTATGTGAATTAGTAGAAGATGATCGAATTGACGAGATTAGTCGCA
TGATGTCAGGTGAAGTCGTGACGGAAAAAACATTCCAACATGCAAAAGAACTGGTTGAAATTGCAGAAGAACATAAACAA
CGCCGTATCATATAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-512)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X1RXM5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

50.871

100

0.518

Multiple sequence alignment