Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | HSISS4_RS01620 | Genome accession | NZ_CP013216 |
| Coordinates | 320038..320628 (+) | Length | 196 a.a. |
| NCBI ID | WP_002883818.1 | Uniprot ID | A0AB33ZFD4 |
| Organism | Streptococcus salivarius strain HSISS4 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 315038..325628
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HSISS4_RS01610 (HSISS4_00282) | - | 316230..319145 (+) | 2916 | WP_021143580.1 | glycoside hydrolase family 68 protein | - |
| HSISS4_RS01615 (HSISS4_00283) | upp | 319235..319864 (+) | 630 | WP_002883819.1 | uracil phosphoribosyltransferase | - |
| HSISS4_RS01620 (HSISS4_00284) | clpP | 320038..320628 (+) | 591 | WP_002883818.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| HSISS4_RS01625 (HSISS4_00285) | - | 320714..321163 (+) | 450 | WP_021143581.1 | YlbF family regulator | - |
| HSISS4_RS01630 (HSISS4_00286) | - | 321156..321437 (+) | 282 | WP_002890011.1 | YlbG family protein | - |
| HSISS4_RS01635 (HSISS4_00287) | - | 321592..322767 (+) | 1176 | WP_002883756.1 | ABC transporter substrate-binding protein | - |
| HSISS4_RS01640 (HSISS4_00288) | - | 322811..323695 (+) | 885 | WP_002883743.1 | branched-chain amino acid ABC transporter permease | - |
| HSISS4_RS01645 (HSISS4_00289) | - | 323699..324649 (+) | 951 | WP_002883720.1 | branched-chain amino acid ABC transporter permease | - |
| HSISS4_RS01650 (HSISS4_00290) | - | 324651..325415 (+) | 765 | WP_021143582.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21533.57 Da Isoelectric Point: 4.4829
>NTDB_id=160691 HSISS4_RS01620 WP_002883818.1 320038..320628(+) (clpP) [Streptococcus salivarius strain HSISS4]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMANNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMANNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=160691 HSISS4_RS01620 WP_002883818.1 320038..320628(+) (clpP) [Streptococcus salivarius strain HSISS4]
ATGATTCCTGTAGTAATTGAACAAACATCACGCGGTGAGCGTTCTTATGATATTTACTCGCGTTTGCTCAAGGATCGTAT
CATCATGTTAACAGGTCCTGTTGAAGATAATATGGCAAACTCAATTATCGCCCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTTTATGTTAATACACCAGGTGGATCCGTTTCGGCAGGTCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAGACTATCGTTATGGGGATGGCAGCATCTATGGGAACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACGCAACAAA
CAGACATGGCTATCGCAGCTGAACACTTGCTCAAGACACGTAATAACTTGGAGCAAATCTTAGCAGATAATTCTGGACAA
CCAATTGAAAAGGTTCATGTAGACGCTGAACGTGACAATTGGATGAGTGCTCAAGAAACGCTTGAATATGGTTTCATCGA
TGAAATCATGGCTAATAACCAATTAAAATAA
ATGATTCCTGTAGTAATTGAACAAACATCACGCGGTGAGCGTTCTTATGATATTTACTCGCGTTTGCTCAAGGATCGTAT
CATCATGTTAACAGGTCCTGTTGAAGATAATATGGCAAACTCAATTATCGCCCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTTTATGTTAATACACCAGGTGGATCCGTTTCGGCAGGTCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAGACTATCGTTATGGGGATGGCAGCATCTATGGGAACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACGCAACAAA
CAGACATGGCTATCGCAGCTGAACACTTGCTCAAGACACGTAATAACTTGGAGCAAATCTTAGCAGATAATTCTGGACAA
CCAATTGAAAAGGTTCATGTAGACGCTGAACGTGACAATTGGATGAGTGCTCAAGAAACGCTTGAATATGGTTTCATCGA
TGAAATCATGGCTAATAACCAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
98.98 |
100 |
0.99 |
| clpP | Streptococcus thermophilus LMD-9 |
98.98 |
100 |
0.99 |
| clpP | Streptococcus pneumoniae Rx1 |
93.846 |
99.49 |
0.934 |
| clpP | Streptococcus pneumoniae D39 |
93.846 |
99.49 |
0.934 |
| clpP | Streptococcus pneumoniae R6 |
93.846 |
99.49 |
0.934 |
| clpP | Streptococcus pneumoniae TIGR4 |
93.846 |
99.49 |
0.934 |
| clpP | Streptococcus pyogenes JRS4 |
90.306 |
100 |
0.903 |
| clpP | Streptococcus pyogenes MGAS315 |
90.306 |
100 |
0.903 |
| clpP | Streptococcus mutans UA159 |
88.265 |
100 |
0.883 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.755 |
100 |
0.878 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
87.245 |
100 |
0.872 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
58.163 |
100 |
0.582 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |