Detailed information NTG0160565

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BBP08_RS09460
• Genome accession: NZ_CP016501
• Coordinates: 1835051..1836160 (-)
• Length: 369 a.a.
• NCBI ID: WP_000264869.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain WC1535
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1830051..1841160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBP08_RS09435 (BBP08_09120)	-	1830567..1831247 (+)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-
BBP08_RS09440 (BBP08_09125)	-	1831257..1831742 (+)	486	WP_001034427.1	arginine repressor	-
BBP08_RS09445 (BBP08_09130)	guaB	1831899..1833380 (+)	1482	WP_000073440.1	IMP dehydrogenase	-
BBP08_RS09450 (BBP08_09135)	-	1833455..1834117 (+)	663	WP_001871057.1	helix-turn-helix transcriptional regulator	-
BBP08_RS09455 (BBP08_09140)	-	1834173..1835039 (+)	867	WP_000398683.1	GRP family sugar transporter	-
BBP08_RS09460 (BBP08_09145)	recF	1835051..1836160 (-)	1110	WP_000264869.1	DNA replication/repair protein RecF	Machinery gene
BBP08_RS09465 (BBP08_09150)	yaaA	1836163..1836516 (-)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
BBP08_RS09470 (BBP08_09155)	-	1836755..1837999 (+)	1245	WP_000706190.1	pitrilysin family protein	-
BBP08_RS09475 (BBP08_09160)	-	1838001..1839284 (+)	1284	WP_000217765.1	pitrilysin family protein	-
BBP08_RS09480 (BBP08_09165)	pgsA	1839407..1839949 (+)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BBP08_RS09485 (BBP08_09170)	-	1839949..1840788 (+)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42452.23 Da
• Isoelectric Point: 7.1759

>NTDB_id=160565 BBP08_RS09460 WP_000264869.1 1835051..1836160(-) (recF) [Streptococcus agalactiae strain WC1535]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHHDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=160565 BBP08_RS09460 WP_000264869.1 1835051..1836160(-) (recF) [Streptococcus agalactiae strain WC1535]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCATGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.361	98.374	0.623
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444