Detailed information NTG0160367

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: A4W81_RS06595
• Genome accession: NZ_CP016465
• Coordinates: 1289132..1291444 (-)
• Length: 770 a.a.
• NCBI ID: WP_076632066.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1284132..1296444

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W81_RS06570 (A4W81_06435)	-	1285231..1286976 (-)	1746	WP_056947092.1	ABC transporter transmembrane domain-containing protein	-
A4W81_RS06575 (A4W81_06440)	-	1287118..1287348 (-)	231	WP_011374970.1	YneF family protein	-
A4W81_RS06580 (A4W81_06445)	-	1287429..1287671 (-)	243	WP_016265356.1	DUF896 domain-containing protein	-
A4W81_RS06585 (A4W81_06450)	dinR/lexA	1287806..1288420 (+)	615	WP_011374972.1	transcriptional repressor LexA	Regulator
A4W81_RS06590 (A4W81_06455)	-	1288590..1289108 (-)	519	WP_011374973.1	adenine phosphoribosyltransferase	-
A4W81_RS06595 (A4W81_06460)	recJ	1289132..1291444 (-)	2313	WP_076632066.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
A4W81_RS06600 (A4W81_06465)	galE	1291588..1292578 (+)	991	Protein_1283	UDP-glucose 4-epimerase GalE	-
A4W81_RS06605 (A4W81_06470)	-	1292664..1293029 (+)	366	WP_011374976.1	DUF1304 domain-containing protein	-
A4W81_RS06610 (A4W81_06475)	-	1293046..1293372 (+)	327	WP_011374977.1	heavy metal-binding domain-containing protein	-
A4W81_RS06615 (A4W81_06480)	-	1293423..1294934 (-)	1512	WP_112221025.1	WxL domain-containing protein	-
A4W81_RS06620 (A4W81_06485)	-	1294953..1295258 (-)	306	WP_337962211.1	hypothetical protein	-
A4W81_RS06625 (A4W81_06490)	-	1295248..1295643 (-)	396	WP_016265361.1	LPXTG cell wall anchor domain-containing protein	-

Sequence

Protein

• Length: 770 a.a.
• Molecular weight: 84855.67 Da
• Isoelectric Point: 4.5390

>NTDB_id=160367 A4W81_RS06595 WP_076632066.1 1289132..1291444(-) (recJ) [Latilactobacillus sakei strain TMW 1.3]
MEAQYEWQLKPVPTEDELQTITKDNPLPKAAAQLLWQRGLRDAEQINDFMNPNVGQLHDPYALHDMQKAIDRIQEAIVNG
EKITIYGDYDADGITSTTLMKETLDDLGADVEVYVPNRFKDGYGPNLEAYKRLIENGTQLIVTVDNGVSGLEPIAYAQEH
GVDVVVTDHHELPSELPNAVAIVHPRHPEGQYPFGELCGVGVAFKVATALLEEIPYDKLDLAAIGTVCDIVPLVDENRTL
VSLGLQQLQNTDRPGLVALCQSAGLEQATLDATNIGFGIGPRLNAIGRLGDATLGVQLLTTLDDEEAVEQAQFIEQQNKK
RQGLVQEITATAMTIAETTENQASATLVIAHEGWHEGVLGIVASHVVEQTGKPTLVLTIDPETGLAKGSGRSVTAFHLFK
ALDAHRELLVHFGGHHMAVGLTAKVDQLALIQAAMNEYAQVNQLDLTGRQPLPVDLALTLADITPDLYQALQQLAPFGSD
NPEPLIELSAPQLADVKQIGADQKHLKMMAVDQQQQLAVLAFNKGALMPDLTAAEDVKLVGSLSENTWRGQTTLQLMVKD
LATSGQVILDQRSNRLTKQLFQSTGDYVFFNDKMREQLQSYLPAGSQALLATDEQVATSQELIVVDEPADLTAFEQFYQQ
QQAAKLSLIFYAKHSAYLEGMPTKQQFATFLVYLRKHPNIEKARLAELAVYLKLQLPLMIFMLQVFFDLGFVRIERGLIT
AELQPEKHALESAPSYQKRLAKIEMEKQLVYSTFTEVKDWLATLPAVANR

Nucleotide

• Length: 2313 bp

>NTDB_id=160367 A4W81_RS06595 WP_076632066.1 1289132..1291444(-) (recJ) [Latilactobacillus sakei strain TMW 1.3]
TTGGAAGCACAATATGAATGGCAATTAAAACCAGTACCAACTGAAGATGAATTACAAACAATTACAAAAGACAATCCGCT
ACCCAAGGCTGCGGCCCAACTTTTGTGGCAACGTGGCTTGCGGGATGCAGAGCAGATCAATGATTTTATGAATCCCAATG
TCGGTCAACTTCACGATCCATACGCTTTGCATGATATGCAAAAGGCGATTGATCGAATTCAAGAAGCGATTGTGAACGGC
GAAAAAATTACGATTTATGGCGATTATGACGCGGACGGGATCACAAGTACCACTTTGATGAAGGAAACTTTAGACGACTT
AGGTGCCGATGTTGAAGTCTATGTGCCTAATCGTTTTAAGGATGGCTACGGGCCTAATTTAGAAGCTTATAAACGCTTGA
TTGAAAATGGCACCCAATTAATTGTGACCGTCGATAACGGGGTGAGTGGCTTAGAACCAATCGCTTACGCGCAAGAACAC
GGTGTTGACGTGGTCGTGACCGATCACCATGAATTACCATCAGAATTACCCAACGCAGTGGCGATTGTGCATCCCAGACA
TCCAGAAGGGCAATATCCTTTTGGCGAACTCTGTGGGGTCGGTGTGGCGTTTAAAGTGGCGACTGCTTTATTAGAAGAGA
TTCCTTACGATAAATTAGATTTAGCCGCAATCGGGACGGTTTGTGATATCGTCCCCCTAGTTGATGAAAACCGAACGTTG
GTTAGTTTGGGCTTACAACAATTACAAAATACTGATCGACCAGGCTTGGTTGCATTATGTCAATCAGCCGGCTTAGAACA
AGCGACACTAGATGCCACTAATATTGGTTTTGGGATTGGTCCCCGTTTAAACGCAATTGGTCGTTTAGGCGATGCGACCC
TTGGTGTGCAATTGTTGACGACACTTGATGACGAAGAAGCAGTTGAACAGGCACAGTTTATTGAACAACAAAATAAAAAA
CGCCAAGGGCTAGTGCAAGAAATTACAGCAACGGCAATGACAATTGCTGAAACAACGGAAAATCAAGCGAGTGCAACCTT
AGTTATTGCCCATGAAGGTTGGCACGAAGGGGTGCTAGGGATTGTAGCTAGTCACGTTGTTGAACAGACCGGTAAACCAA
CCTTAGTCTTGACGATTGATCCGGAAACTGGTTTAGCTAAAGGCTCTGGCCGTAGTGTGACAGCTTTTCATTTATTTAAA
GCGTTAGATGCCCACCGTGAATTATTGGTTCATTTTGGTGGCCATCACATGGCAGTTGGCTTGACTGCTAAGGTTGATCA
ATTAGCGCTGATTCAAGCTGCAATGAACGAGTATGCGCAAGTTAATCAGTTAGATTTAACGGGACGCCAACCATTACCAG
TTGATTTGGCGCTGACGTTGGCTGACATTACGCCTGATTTATACCAAGCATTACAACAACTGGCACCGTTTGGCAGTGAT
AATCCAGAACCGTTGATTGAACTTAGTGCGCCCCAGTTAGCCGATGTCAAACAAATTGGTGCTGATCAGAAGCATTTGAA
GATGATGGCGGTTGATCAACAACAACAATTAGCGGTTTTAGCTTTCAATAAAGGGGCTTTGATGCCCGATTTAACTGCCG
CTGAAGATGTGAAATTAGTCGGAAGTTTGAGTGAGAATACTTGGCGTGGCCAGACGACGTTGCAATTAATGGTAAAAGAC
CTTGCCACGAGTGGACAAGTCATACTTGATCAGCGTAGCAATCGCCTGACAAAACAATTATTCCAATCAACAGGCGACTA
CGTCTTTTTTAATGATAAAATGCGCGAGCAACTGCAGTCTTATTTACCGGCAGGGAGTCAGGCACTGTTAGCGACCGATG
AACAAGTTGCTACTAGCCAAGAGTTAATTGTAGTTGATGAACCGGCTGATTTAACTGCTTTTGAACAATTTTATCAACAA
CAACAGGCCGCTAAATTAAGCTTGATTTTTTATGCTAAACACTCTGCTTACTTAGAAGGAATGCCGACAAAACAGCAGTT
TGCGACTTTCTTAGTCTACTTACGGAAGCACCCAAATATCGAAAAAGCGCGGTTAGCTGAATTAGCGGTGTATTTAAAAT
TACAATTACCGCTAATGATTTTCATGTTGCAGGTGTTTTTTGACCTCGGATTTGTTAGAATAGAACGTGGTCTGATTACG
GCCGAGTTACAACCTGAAAAGCATGCACTGGAAAGTGCACCAAGTTATCAAAAACGATTAGCTAAAATTGAAATGGAAAA
ACAGCTTGTTTATTCAACCTTTACCGAGGTGAAAGACTGGCTAGCAACTCTCCCAGCAGTAGCAAATCGCTAA

Domains

Predicted by InterProScan.

• DHH family (DHH) (82-226)

• DHHA1 domain (DHHA1) (317-438)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-761)

• RecJ OB domain (RecJ_OB) (454-560)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	40.21	98.831	0.397
recJ	Bacillus subtilis subsp. subtilis str. 168	37.371	100	0.377