Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ASU36_RS02000 Genome accession   NZ_CP013137
Coordinates   404765..405751 (+) Length   328 a.a.
NCBI ID   WP_000959278.1    Uniprot ID   A0A6B5F529
Organism   Staphylococcus aureus strain XQ     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 399765..410751
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASU36_RS01975 (ASU36_01975) opp4B 399967..400929 (+) 963 WP_058007955.1 oligopeptide ABC transporter permease -
  ASU36_RS01980 (ASU36_01980) opp4C 400941..401822 (+) 882 WP_001180269.1 oligopeptide ABC transporter permease -
  ASU36_RS01985 (ASU36_01985) trpS 401864..402854 (-) 991 Protein_389 tryptophan--tRNA ligase -
  ASU36_RS01990 (ASU36_01990) spxA 403149..403544 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  ASU36_RS01995 (ASU36_01995) mecA 403925..404644 (+) 720 WP_001217727.1 adaptor protein MecA -
  ASU36_RS02000 (ASU36_02000) coiA 404765..405751 (+) 987 WP_000959278.1 competence protein CoiA Machinery gene
  ASU36_RS02005 (ASU36_02005) pepF 405799..407607 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  ASU36_RS02010 (ASU36_02010) yjbH 408067..408873 (-) 807 WP_000896694.1 protease adaptor protein YjbH -
  ASU36_RS02015 (ASU36_02015) - 408896..409261 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  ASU36_RS02020 (ASU36_02020) - 409365..409958 (-) 594 WP_000224616.1 CYTH domain-containing protein -
  ASU36_RS02025 (ASU36_02025) - 410144..410491 (+) 348 WP_001242107.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38679.31 Da        Isoelectric Point: 9.5882

>NTDB_id=160223 ASU36_RS02000 WP_000959278.1 404765..405751(+) (coiA) [Staphylococcus aureus strain XQ]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTVQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALDSKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=160223 ASU36_RS02000 WP_000959278.1 404765..405751(+) (coiA) [Staphylococcus aureus strain XQ]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTTAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTTG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTACAG
TTAACTGTTCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGATAGCAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6B5F529

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.646

100

0.966
  coiA Staphylococcus aureus MW2

96.646

100

0.966

Multiple sequence alignment