Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SE1039_RS09080 | Genome accession | NZ_CP013114 |
| Coordinates | 1864332..1864751 (-) | Length | 139 a.a. |
| NCBI ID | WP_002507087.1 | Uniprot ID | A0A1E5TFZ6 |
| Organism | Staphylococcus equorum strain KS1039 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1859332..1869751
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SE1039_RS09055 (SE1039_17820) | thiE | 1859850..1860488 (-) | 639 | WP_021339941.1 | thiamine phosphate synthase | - |
| SE1039_RS09060 (SE1039_17830) | thiM | 1860488..1861279 (-) | 792 | WP_056936209.1 | hydroxyethylthiazole kinase | - |
| SE1039_RS09065 (SE1039_17840) | thiD | 1861272..1862093 (-) | 822 | WP_056935794.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SE1039_RS09070 (SE1039_17850) | tenA | 1862086..1862775 (-) | 690 | WP_056935795.1 | thiaminase II | - |
| SE1039_RS09075 (SE1039_17860) | - | 1863168..1863848 (-) | 681 | WP_002507088.1 | transglycosylase family protein | - |
| SE1039_RS09080 (SE1039_17870) | ssb | 1864332..1864751 (-) | 420 | WP_002507087.1 | single-stranded DNA-binding protein | Machinery gene |
| SE1039_RS09085 (SE1039_17880) | - | 1864942..1865382 (+) | 441 | WP_002507086.1 | YwpF-like family protein | - |
| SE1039_RS09090 (SE1039_17890) | fabZ | 1865451..1865891 (-) | 441 | WP_002507085.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SE1039_RS09095 (SE1039_17900) | murA | 1865949..1867214 (-) | 1266 | WP_002507084.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SE1039_RS09100 (SE1039_17910) | - | 1867321..1867554 (-) | 234 | WP_002507083.1 | DUF1146 family protein | - |
| SE1039_RS09105 (SE1039_17920) | - | 1867877..1868281 (-) | 405 | WP_002507082.1 | F0F1 ATP synthase subunit epsilon | - |
| SE1039_RS09110 (SE1039_17930) | atpD | 1868301..1869713 (-) | 1413 | WP_002507081.1 | F0F1 ATP synthase subunit beta | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 16259.49 Da Isoelectric Point: 4.8624
>NTDB_id=160019 SE1039_RS09080 WP_002507087.1 1864332..1864751(-) (ssb) [Staphylococcus equorum strain KS1039]
MINNIVIVGRLTKDPKIYEKEGKKLATFCVAVNRNYKDKDQNTVCDYLYCKAFGKIADNIEKYINQGSLVGITGQMQSRK
FEKEGQMHFVSELYIETIKFMSPRTKNETDELFEPFPLEQDHESFNEINIQENDIYEIV
MINNIVIVGRLTKDPKIYEKEGKKLATFCVAVNRNYKDKDQNTVCDYLYCKAFGKIADNIEKYINQGSLVGITGQMQSRK
FEKEGQMHFVSELYIETIKFMSPRTKNETDELFEPFPLEQDHESFNEINIQENDIYEIV
Nucleotide
Download Length: 420 bp
>NTDB_id=160019 SE1039_RS09080 WP_002507087.1 1864332..1864751(-) (ssb) [Staphylococcus equorum strain KS1039]
ATGATAAATAACATCGTCATTGTAGGACGATTAACAAAAGATCCCAAAATTTATGAAAAGGAGGGGAAGAAGTTAGCTAC
CTTTTGTGTAGCAGTAAATAGAAATTATAAAGATAAAGATCAAAATACAGTCTGTGATTATTTGTATTGTAAAGCATTTG
GTAAAATTGCTGACAATATTGAAAAGTATATCAATCAAGGATCACTTGTAGGTATTACTGGACAAATGCAATCACGTAAA
TTTGAAAAAGAAGGACAGATGCATTTTGTATCAGAACTTTATATCGAAACAATTAAATTCATGTCTCCACGAACTAAAAA
TGAAACAGATGAACTTTTTGAACCATTCCCATTAGAGCAAGATCATGAATCATTCAACGAAATTAATATTCAAGAAAATG
ATATATACGAAATTGTATAA
ATGATAAATAACATCGTCATTGTAGGACGATTAACAAAAGATCCCAAAATTTATGAAAAGGAGGGGAAGAAGTTAGCTAC
CTTTTGTGTAGCAGTAAATAGAAATTATAAAGATAAAGATCAAAATACAGTCTGTGATTATTTGTATTGTAAAGCATTTG
GTAAAATTGCTGACAATATTGAAAAGTATATCAATCAAGGATCACTTGTAGGTATTACTGGACAAATGCAATCACGTAAA
TTTGAAAAAGAAGGACAGATGCATTTTGTATCAGAACTTTATATCGAAACAATTAAATTCATGTCTCCACGAACTAAAAA
TGAAACAGATGAACTTTTTGAACCATTCCCATTAGAGCAAGATCATGAATCATTCAACGAAATTAATATTCAAGAAAATG
ATATATACGAAATTGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
61.594 |
99.281 |
0.612 |
| ssb | Staphylococcus aureus MW2 |
60.87 |
99.281 |
0.604 |