Detailed information NTG0159940

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: A9256_RS10500
• Genome accession: NZ_CP016391
• Coordinates: 2067522..2068631 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain FWL1402
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2062522..2073631

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9256_RS10475 (A9256_10475)	-	2062894..2063733 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
A9256_RS10480 (A9256_10480)	pgsA	2063733..2064275 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
A9256_RS10485 (A9256_10485)	yfmH	2064398..2065681 (-)	1284	WP_000217765.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
A9256_RS10490 (A9256_10490)	yfmF	2065683..2066927 (-)	1245	WP_000706190.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
A9256_RS10495 (A9256_10495)	yaaA	2067166..2067519 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
A9256_RS10500 (A9256_10500)	recF	2067522..2068631 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
A9256_RS10505 (A9256_10505)	-	2068643..2069509 (-)	867	WP_000398683.1	GRP family sugar transporter	-
A9256_RS10510 (A9256_10510)	-	2069565..2070227 (-)	663	WP_001871057.1	helix-turn-helix domain-containing protein	-
A9256_RS10515 (A9256_10515)	guaB	2070302..2071783 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
A9256_RS10520 (A9256_10520)	-	2071940..2072425 (-)	486	WP_001034427.1	arginine repressor	-
A9256_RS10525 (A9256_10525)	-	2072435..2073115 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=159940 A9256_RS10500 WP_000264870.1 2067522..2068631(+) (recF) [Streptococcus agalactiae strain FWL1402]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=159940 A9256_RS10500 WP_000264870.1 2067522..2068631(+) (recF) [Streptococcus agalactiae strain FWL1402]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447