Detailed information NTG0159176

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: A9494_RS10350
• Genome accession: NZ_CP016175
• Coordinates: 2054043..2055137 (+)
• Length: 364 a.a.
• NCBI ID: WP_012028050.1
• Uniprot ID: A0A0H3N2H6
• Organism: Streptococcus suis strain LSM102
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2049043..2060137

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9494_RS10325 (A9494_10125)	pgsA	2049562..2050101 (-)	540	WP_012028045.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
A9494_RS10330 (A9494_10130)	rodZ	2050111..2050968 (-)	858	WP_012028600.1	cytoskeleton protein RodZ	-
A9494_RS10335 (A9494_10135)	yfmH	2051050..2052333 (-)	1284	WP_012775413.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
A9494_RS10340 (A9494_10140)	yfmF	2052330..2053583 (-)	1254	WP_012028048.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
A9494_RS10345 (A9494_10145)	yaaA	2053657..2054040 (+)	384	WP_012028049.1	S4 domain-containing protein YaaA	-
A9494_RS10350 (A9494_10150)	recF	2054043..2055137 (+)	1095	WP_012028050.1	DNA replication/repair protein RecF	Machinery gene
A9494_RS10355 (A9494_10155)	guaB	2055409..2056890 (-)	1482	WP_012028051.1	IMP dehydrogenase	-
A9494_RS10360 (A9494_10160)	trpS	2057122..2058147 (-)	1026	WP_012775414.1	tryptophan--tRNA ligase	-
A9494_RS10365 (A9494_10165)	-	2058502..2059374 (+)	873	WP_012775460.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42188.24 Da
• Isoelectric Point: 6.9173

>NTDB_id=159176 A9494_RS10350 WP_012028050.1 2054043..2055137(+) (recF) [Streptococcus suis strain LSM102]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIELTDDVNLIDKFLT
ELEKSRKRDLFKKNTGVGPHRDDVAFFINGMNAHYASQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=159176 A9494_RS10350 WP_012028050.1 2054043..2055137(+) (recF) [Streptococcus suis strain LSM102]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGACGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCTGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAGACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAACTAGAAAAGTCTCGTAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGCTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTAGCTGAAATTG
AGCTGATGAAAGAAGTCACACGAGAGTACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTATTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0A0H3N2H6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.36	99.176	0.698
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442