Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SAST40_RS12905 Genome accession   NZ_CP012979
Coordinates   2579968..2580633 (-) Length   221 a.a.
NCBI ID   WP_000697877.1    Uniprot ID   A0A0D1JN68
Organism   Staphylococcus aureus strain ST20130940     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2574968..2585633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAST40_RS12880 - 2575438..2575551 (-) 114 Protein_2449 hypothetical protein -
  SAST40_RS12890 (SAST40_03634) - 2576210..2578210 (-) 2001 WP_000776740.1 ABC transporter permease -
  SAST40_RS12895 (SAST40_03635) - 2578207..2578962 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  SAST40_RS12900 (SAST40_04061) braS 2579070..2579957 (-) 888 WP_000143417.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  SAST40_RS12905 (SAST40_02644) braR 2579968..2580633 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  SAST40_RS12910 (SAST40_03637) - 2580659..2580859 (-) 201 WP_000604727.1 hypothetical protein -
  SAST40_RS12920 (SAST40_04062) - 2581057..2582481 (+) 1425 WP_000953748.1 alkaline phosphatase -
  SAST40_RS14480 (SAST40_04063) - 2582541..2582642 (-) 102 WP_000731972.1 SE2200 family small protein -
  SAST40_RS12925 (SAST40_04064) - 2582764..2583219 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  SAST40_RS12930 (SAST40_02649) - 2583464..2584225 (-) 762 WP_000323441.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25415.49 Da        Isoelectric Point: 4.7961

>NTDB_id=158922 SAST40_RS12905 WP_000697877.1 2579968..2580633(-) (braR) [Staphylococcus aureus strain ST20130940]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=158922 SAST40_RS12905 WP_000697877.1 2579968..2580633(-) (braR) [Staphylococcus aureus strain ST20130940]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATTATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1JN68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

100

100

1

Multiple sequence alignment