Detailed information NTG0158901

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: A9497_RS05950
• Genome accession: NZ_CP016026
• Coordinates: 1149326..1150426 (+)
• Length: 366 a.a.
• NCBI ID: WP_024704278.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain KLDS SM
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1144326..1155426

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9497_RS05925 (A9497_05925)	pgsA	1144868..1145410 (-)	543	WP_024704275.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
A9497_RS05930 (A9497_05930)	-	1145423..1146280 (-)	858	WP_011681760.1	helix-turn-helix domain-containing protein	-
A9497_RS05935 (A9497_05935)	yfmH	1146339..1147616 (-)	1278	WP_024704276.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
A9497_RS05940 (A9497_05940)	yfmF	1147618..1148868 (-)	1251	WP_024704277.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
A9497_RS05945 (A9497_05945)	yaaA	1148947..1149323 (+)	377	Protein_1151	S4 domain-containing protein YaaA	-
A9497_RS05950 (A9497_05950)	recF	1149326..1150426 (+)	1101	WP_024704278.1	DNA replication/repair protein RecF	Machinery gene
A9497_RS05955 (A9497_05955)	guaB	1150595..1152076 (-)	1482	WP_011227627.1	IMP dehydrogenase	-
A9497_RS05960 (A9497_05960)	trpS	1152253..1153275 (-)	1023	WP_011681763.1	tryptophan--tRNA ligase	-
A9497_RS05965 (A9497_05965)	-	1153703..1154575 (+)	873	WP_011681764.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42172.35 Da
• Isoelectric Point: 9.2442

>NTDB_id=158901 A9497_RS05950 WP_024704278.1 1149326..1150426(+) (recF) [Streptococcus thermophilus strain KLDS SM]
MWLKKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=158901 A9497_RS05950 WP_024704278.1 1149326..1150426(+) (recF) [Streptococcus thermophilus strain KLDS SM]
ATGTGGCTTAAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCATCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACAGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACGACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432