Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SAST42_RS10515 | Genome accession | NZ_CP012976 |
| Coordinates | 2089010..2089405 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain ST20130942 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2084010..2094405
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAST42_RS10490 (SAST42_03662) | thiE | 2084610..2085251 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| SAST42_RS10495 (SAST42_02046) | thiM | 2085253..2086044 (-) | 792 | WP_001108489.1 | hydroxyethylthiazole kinase | - |
| SAST42_RS10500 (SAST42_02047) | thiD | 2086028..2086858 (-) | 831 | WP_000594967.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SAST42_RS10505 (SAST42_02048) | tenA | 2086851..2087540 (-) | 690 | WP_000396067.1 | thiaminase II | - |
| SAST42_RS10510 (SAST42_02050) | sceD | 2087926..2088621 (-) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| SAST42_RS10515 (SAST42_02051) | ssb | 2089010..2089405 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| SAST42_RS10520 (SAST42_02052) | - | 2089599..2090039 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| SAST42_RS10525 (SAST42_02053) | fabZ | 2090098..2090538 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SAST42_RS10530 (SAST42_02054) | murA | 2090572..2091837 (-) | 1266 | WP_000358010.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SAST42_RS10535 (SAST42_02056) | - | 2091948..2092181 (-) | 234 | WP_000384524.1 | DUF1146 family protein | - |
| SAST42_RS10540 | - | 2092313..2092405 (-) | 93 | WP_031824610.1 | hypothetical protein | - |
| SAST42_RS10545 (SAST42_02057) | - | 2092741..2093145 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=158834 SAST42_RS10515 WP_000932694.1 2089010..2089405(-) (ssb) [Staphylococcus aureus strain ST20130942]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=158834 SAST42_RS10515 WP_000932694.1 2089010..2089405(-) (ssb) [Staphylococcus aureus strain ST20130942]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |