Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SAST39_RS10445 | Genome accession | NZ_CP012970 |
| Coordinates | 2086164..2086559 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain ST20130939 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2081164..2091559
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAST39_RS10420 (SAST39_03424) | thiE | 2081570..2082211 (-) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
| SAST39_RS10425 (SAST39_02104) | thiM | 2082213..2083004 (-) | 792 | WP_001108480.1 | hydroxyethylthiazole kinase | - |
| SAST39_RS10430 (SAST39_02105) | thiD | 2082988..2083818 (-) | 831 | WP_000594959.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SAST39_RS10435 (SAST39_02106) | tenA | 2083811..2084500 (-) | 690 | WP_000396079.1 | thiaminase II | - |
| SAST39_RS10440 (SAST39_02108) | sceD | 2085080..2085775 (-) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| SAST39_RS10445 (SAST39_02109) | ssb | 2086164..2086559 (-) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| SAST39_RS10450 (SAST39_02110) | - | 2086753..2087193 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| SAST39_RS10455 (SAST39_02111) | fabZ | 2087252..2087692 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SAST39_RS10460 (SAST39_02112) | murA | 2087726..2088991 (-) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SAST39_RS10465 (SAST39_02114) | - | 2089102..2089335 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| SAST39_RS10470 | - | 2089467..2089559 (-) | 93 | WP_031835036.1 | hypothetical protein | - |
| SAST39_RS10475 (SAST39_02116) | - | 2089895..2090299 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=158712 SAST39_RS10445 WP_000932694.1 2086164..2086559(-) (ssb) [Staphylococcus aureus strain ST20130939]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=158712 SAST39_RS10445 WP_000932694.1 2086164..2086559(-) (ssb) [Staphylococcus aureus strain ST20130939]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |