Detailed information
Bioinformatically predicted
Overview
| Name | comEC | Type | Machinery gene |
| Locus tag | AOB58_RS13715 | Genome accession | NZ_CP012968 |
| Coordinates | 371129..371560 (+) | Length | 143 a.a. |
| NCBI ID | WP_233640457.1 | Uniprot ID | - |
| Organism | Staphylococcus sp. AntiMn-1 isolate deep-sea sediment of east Pacific Nodule Province | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 366129..376560
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOB58_RS01870 (AOB58_347) | yqeK | 366380..366964 (+) | 585 | WP_002507457.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| AOB58_RS01875 (AOB58_348) | rsfS | 366965..367318 (+) | 354 | WP_002507458.1 | ribosome silencing factor | - |
| AOB58_RS01880 (AOB58_349) | - | 367321..368037 (+) | 717 | WP_064782880.1 | class I SAM-dependent methyltransferase | - |
| AOB58_RS01885 (AOB58_350) | - | 368088..368801 (+) | 714 | WP_021339146.1 | helix-hairpin-helix domain-containing protein | - |
| AOB58_RS01890 (AOB58_351) | - | 368886..369347 (+) | 462 | WP_002507461.1 | ComE operon protein 2 | - |
| AOB58_RS01895 (AOB58_352) | - | 369594..371063 (+) | 1470 | WP_237283164.1 | ComEC/Rec2 family competence protein | - |
| AOB58_RS13715 (AOB58_353) | comEC | 371129..371560 (+) | 432 | WP_233640457.1 | MBL fold metallo-hydrolase | Machinery gene |
| AOB58_RS01900 (AOB58_354) | holA | 371633..372607 (+) | 975 | WP_002507463.1 | DNA polymerase III subunit delta | - |
| AOB58_RS01905 (AOB58_355) | rpsT | 372765..373016 (-) | 252 | WP_002507464.1 | 30S ribosomal protein S20 | - |
| AOB58_RS01910 (AOB58_356) | lepA | 373338..375161 (+) | 1824 | WP_021339276.1 | translation elongation factor 4 | - |
| AOB58_RS01915 (AOB58_357) | hemW | 375260..376384 (+) | 1125 | WP_064782881.1 | radical SAM family heme chaperone HemW | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 16019.34 Da Isoelectric Point: 8.0414
>NTDB_id=158656 AOB58_RS13715 WP_233640457.1 371129..371560(+) (comEC) [Staphylococcus sp. AntiMn-1 isolate deep-sea sediment of east Pacific Nodule Province]
MQSFSLNKAKIKLLDATITTSNDLNEQSIITLIEYDKFKILLMGDASKNNEQLLLNKYHLENIDILKVGHHGSKTSSSAS
FIDTLQPKISLISVGRNNRYKLPNKEIVECLKSINSQVLQTSENGEISITLNPNFELSANLKQ
MQSFSLNKAKIKLLDATITTSNDLNEQSIITLIEYDKFKILLMGDASKNNEQLLLNKYHLENIDILKVGHHGSKTSSSAS
FIDTLQPKISLISVGRNNRYKLPNKEIVECLKSINSQVLQTSENGEISITLNPNFELSANLKQ
Nucleotide
Download Length: 432 bp
>NTDB_id=158656 AOB58_RS13715 WP_233640457.1 371129..371560(+) (comEC) [Staphylococcus sp. AntiMn-1 isolate deep-sea sediment of east Pacific Nodule Province]
ATGCAAAGTTTTTCACTTAACAAAGCGAAAATTAAATTATTAGATGCCACAATTACAACATCGAATGATCTAAATGAACA
ATCAATTATTACATTAATTGAATATGATAAATTCAAGATTTTACTTATGGGTGATGCTTCAAAAAATAACGAACAGTTAT
TGTTAAATAAGTATCACCTTGAAAATATTGATATTTTAAAAGTAGGACACCATGGTAGTAAAACAAGTTCTAGCGCATCT
TTTATAGATACACTTCAGCCGAAAATAAGTCTGATTTCTGTTGGTCGAAATAATAGATATAAATTACCCAACAAAGAAAT
AGTAGAATGCTTAAAAAGCATTAATTCTCAAGTTCTACAAACAAGTGAAAATGGAGAAATTTCTATTACATTAAATCCTA
ATTTTGAACTTAGTGCTAATCTGAAACAATGA
ATGCAAAGTTTTTCACTTAACAAAGCGAAAATTAAATTATTAGATGCCACAATTACAACATCGAATGATCTAAATGAACA
ATCAATTATTACATTAATTGAATATGATAAATTCAAGATTTTACTTATGGGTGATGCTTCAAAAAATAACGAACAGTTAT
TGTTAAATAAGTATCACCTTGAAAATATTGATATTTTAAAAGTAGGACACCATGGTAGTAAAACAAGTTCTAGCGCATCT
TTTATAGATACACTTCAGCCGAAAATAAGTCTGATTTCTGTTGGTCGAAATAATAGATATAAATTACCCAACAAAGAAAT
AGTAGAATGCTTAAAAAGCATTAATTCTCAAGTTCTACAAACAAGTGAAAATGGAGAAATTTCTATTACATTAAATCCTA
ATTTTGAACTTAGTGCTAATCTGAAACAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEC | Staphylococcus aureus N315 |
54.286 |
97.902 |
0.531 |
| comEC | Staphylococcus aureus MW2 |
54.286 |
97.902 |
0.531 |