Detailed information NTG0158400

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: RALBFv3_RS14765
• Genome accession: NZ_CP012943
• Coordinates: 3218553..3221093 (+)
• Length: 846 a.a.
• NCBI ID: WP_014617396.1
• Uniprot ID: F6G2D6
• Organism: Ralstonia solanacearum strain IBSBF1503
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3213553..3226093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RALBFv3_RS14745 (RALBFv3_14730)	-	3214570..3215649 (-)	1080	WP_014617400.1	hypothetical protein	-
RALBFv3_RS14750 (RALBFv3_14735)	-	3215722..3216972 (+)	1251	WP_003268713.1	lipoprotein-releasing ABC transporter permease subunit	-
RALBFv3_RS14755 (RALBFv3_14740)	lolD	3216965..3217708 (+)	744	WP_014617398.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
RALBFv3_RS14760 (RALBFv3_14745)	-	3217728..3218543 (+)	816	WP_014617397.1	TatD family hydrolase	-
RALBFv3_RS14765 (RALBFv3_14750)	comA	3218553..3221093 (+)	2541	WP_014617396.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RALBFv3_RS14770 (RALBFv3_14755)	-	3221199..3222680 (+)	1482	WP_003264255.1	circularly permuted type 2 ATP-grasp protein	-
RALBFv3_RS14775 (RALBFv3_14760)	-	3222759..3223721 (+)	963	WP_042548831.1	alpha-E domain-containing protein	-
RALBFv3_RS14780 (RALBFv3_14765)	-	3223779..3224615 (+)	837	WP_039549867.1	transglutaminase family protein	-
RALBFv3_RS14785 (RALBFv3_14770)	-	3224700..3225614 (+)	915	WP_014617393.1	proteasome-type protease	-

Sequence

Protein

• Length: 846 a.a.
• Molecular weight: 90342.86 Da
• Isoelectric Point: 10.1608

>NTDB_id=158400 RALBFv3_RS14765 WP_014617396.1 3218553..3221093(+) (comA) [Ralstonia solanacearum strain IBSBF1503]
MRALLIGFVAGCMALQTRPVLVPVWQPVLLALACGLIALALRRAGQSPMLISGIAVLVAACVGFGWSDWRAQQRLSVVLA
PEWEGKAIQATGVVAELPQVTEDATRFLFHIESSDAGDAVPPRVRLSWYGKRNWNERRRERGAIADRRAGIPDLQPGQRW
QLTLRLKRPHSLMNPGGFDGEYAMLADDIRAAGTVQTGKRARNALIGETDAGFGLQVERWRAAVRRHILAALPDARYGPV
MVALVVGDQSGIAQADWERFRRTGISHLVSISGLHITMIAGLFAALWMALWRRSFGLARWLRTPLPLRMPAQRAAAIAAM
AAAFAYCLLAGMGVPAQRTLLMLATVAVARLTDRSVPASLSLCWAAAVVALVDPWAVMSAGFWLSFGAVAVIFLAARMAA
ADAGGDARPSAWLRRAWRGLRGGARIQLAVTVGLLPLTLLLFQQVSVVSAAANALAIPVVSLVTTPLALIGAALPEPWAQ
PVLAWAEASFGWLVSWLDGLSAPAWSVWTAPVAPAWAWLLAIGGVPLLLAPGGHRAWAWRAQGVLLLLPMLLARAPAPPP
GAFRLVAFDIGQGAAALVETAGHRLLFDTGPRYGDLADAADRVIVPYLRGHGVQAIDTLVVSHEDSDHAGGTETVMAGVP
VRTMLASLPPGHRLGERARAYGIDTAGCLAGQRWTWDGVAFEILHPVQAPPDRAPPSSNARSCVLRIAGERHAALLAGDI
GSAQEMALIAAEAPERLMADILLVPHHGSKTSSSGAFLDAVSPQVAIFQVGYRNRYGHPHPQVWQRYGARDIERLRTDAA
GAVVIETGGDALEVRTARSMRPRYWSSALEVAALADATEAPADAQP

Nucleotide

• Length: 2541 bp

>NTDB_id=158400 RALBFv3_RS14765 WP_014617396.1 3218553..3221093(+) (comA) [Ralstonia solanacearum strain IBSBF1503]
ATGCGCGCCCTGCTGATCGGCTTTGTCGCGGGGTGCATGGCGTTGCAGACGCGGCCGGTGCTGGTGCCGGTCTGGCAGCC
GGTGCTGCTGGCGCTGGCGTGCGGTTTGATTGCGTTGGCGTTGCGGCGCGCGGGGCAGTCGCCGATGCTCATCTCCGGGA
TTGCCGTGCTGGTGGCTGCGTGTGTCGGTTTCGGCTGGAGCGACTGGCGCGCGCAGCAGCGGCTGTCCGTGGTGCTGGCG
CCCGAATGGGAAGGCAAGGCCATCCAGGCGACGGGCGTCGTGGCCGAGCTGCCGCAGGTCACCGAGGACGCCACGCGTTT
CCTGTTCCACATCGAATCCAGCGACGCAGGCGACGCCGTGCCGCCGCGCGTGCGCCTGTCATGGTATGGCAAGCGCAACT
GGAACGAACGGAGGCGGGAGCGTGGGGCGATCGCCGATCGCCGTGCCGGCATCCCCGACCTGCAGCCCGGCCAGCGCTGG
CAACTGACGCTGCGGCTCAAGCGGCCGCACAGCCTGATGAATCCCGGCGGCTTCGACGGCGAATACGCGATGCTCGCCGA
CGACATCCGCGCCGCGGGCACCGTGCAGACCGGCAAACGCGCGCGCAATGCGCTGATCGGCGAAACCGATGCCGGCTTCG
GTCTCCAGGTCGAGCGCTGGCGTGCCGCGGTGCGGCGGCATATCCTCGCCGCCTTGCCCGATGCGCGTTATGGGCCGGTG
ATGGTCGCCCTGGTGGTGGGCGATCAGAGCGGCATCGCGCAAGCGGATTGGGAGCGCTTCCGCCGCACCGGCATCAGCCA
TCTCGTCAGCATTTCCGGCCTGCACATCACGATGATCGCCGGGCTGTTCGCCGCGCTCTGGATGGCGCTGTGGCGGCGCT
CGTTCGGCCTGGCCCGCTGGTTGCGCACGCCGTTGCCGCTGCGCATGCCGGCCCAGCGCGCCGCCGCCATCGCGGCGATG
GCGGCGGCGTTCGCCTATTGCCTGCTGGCGGGGATGGGCGTGCCGGCGCAGCGCACGCTGCTGATGCTCGCGACCGTCGC
CGTGGCGCGGCTGACCGATCGCAGCGTGCCGGCCAGCCTGTCGCTGTGCTGGGCTGCGGCCGTGGTGGCGCTGGTGGATC
CTTGGGCGGTCATGTCGGCGGGATTTTGGCTGTCGTTCGGCGCGGTGGCGGTCATCTTCCTGGCCGCGCGGATGGCGGCC
GCCGATGCCGGGGGCGATGCCCGGCCATCCGCCTGGCTCAGGCGCGCCTGGCGCGGCCTGCGCGGCGGCGCCCGCATCCA
GTTGGCCGTGACGGTCGGCCTGCTGCCGTTGACGCTGCTGTTGTTCCAGCAGGTCTCGGTGGTGTCGGCCGCGGCCAACG
CGCTCGCGATTCCGGTGGTCAGCCTGGTCACCACGCCGCTGGCGTTGATCGGCGCGGCGCTGCCTGAGCCGTGGGCGCAG
CCGGTGCTGGCGTGGGCCGAGGCCAGCTTCGGGTGGCTCGTGTCGTGGCTGGATGGACTGTCGGCGCCCGCCTGGTCGGT
GTGGACGGCGCCCGTCGCGCCCGCCTGGGCGTGGCTGTTGGCCATCGGCGGCGTGCCGTTGCTGCTCGCGCCGGGCGGGC
ATCGCGCCTGGGCCTGGCGGGCGCAGGGCGTGCTCCTGCTGCTGCCGATGCTGCTCGCTCGTGCGCCGGCACCGCCGCCG
GGCGCGTTCCGCCTGGTCGCATTCGACATCGGTCAGGGCGCCGCCGCGCTGGTCGAGACGGCCGGCCACCGGCTGCTGTT
CGATACCGGCCCGCGCTATGGCGACCTGGCCGATGCCGCCGATCGTGTGATCGTCCCGTATCTGCGCGGACACGGCGTGC
AGGCCATCGATACGCTGGTGGTCAGCCACGAGGACAGCGACCACGCCGGCGGCACCGAAACGGTGATGGCCGGGGTGCCG
GTGCGCACCATGCTGGCGTCCTTGCCGCCCGGCCACCGGCTCGGCGAGCGGGCCCGCGCCTACGGCATCGATACCGCGGG
CTGCCTGGCGGGGCAGCGCTGGACCTGGGATGGCGTTGCCTTCGAAATCCTGCATCCGGTGCAGGCGCCCCCCGATAGGG
CGCCGCCGTCCAGCAACGCCCGCAGCTGCGTGCTGCGCATTGCCGGCGAGCGCCATGCCGCCTTGCTGGCCGGCGACATC
GGCAGCGCCCAGGAAATGGCGCTGATCGCCGCCGAAGCGCCGGAGCGGCTCATGGCAGATATCTTGCTTGTGCCCCATCA
CGGCAGCAAGACGAGCTCCAGCGGTGCGTTTCTGGACGCGGTTTCTCCGCAGGTGGCGATTTTCCAGGTCGGCTACCGCA
ACCGGTATGGTCATCCGCATCCGCAGGTCTGGCAGCGCTACGGCGCGCGCGACATCGAGCGGTTGCGTACCGACGCAGCC
GGGGCCGTCGTCATCGAGACGGGCGGCGATGCACTGGAGGTGCGGACCGCGCGGTCGATGCGGCCGCGCTACTGGTCCTC
GGCGCTCGAGGTGGCAGCCCTGGCAGACGCCACGGAGGCGCCCGCCGACGCGCAGCCGTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-197)

• Beta-lactamase superfamily domain (Lactamase_B_2) (583-743)

• Competence protein (Competence) (244-529)

3D structure

• AlphaFold DB: F6G2D6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Ralstonia pseudosolanacearum GMI1000	85.377	100	0.856