Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   AOT11_RS15590 Genome accession   NZ_CP012881
Coordinates   3199200..3200693 (+) Length   497 a.a.
NCBI ID   WP_017422093.1    Uniprot ID   -
Organism   Vibrio vulnificus NBRC 15645 = ATCC 27562     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 3194200..3205693
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOT11_RS15575 (AOT11_21795) - 3195224..3195916 (+) 693 WP_026050691.1 tyrosine-protein kinase family protein -
  AOT11_RS15580 (AOT11_21800) - 3195931..3196731 (+) 801 WP_039547260.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
  AOT11_RS15585 (AOT11_21805) - 3196755..3199043 (+) 2289 WP_017422092.1 ATP-binding protein -
  AOT11_RS15590 (AOT11_21810) luxO 3199200..3200693 (+) 1494 WP_017422093.1 sigma-54-dependent transcriptional regulator Regulator
  AOT11_RS15595 (AOT11_21815) - 3200686..3201819 (+) 1134 WP_017422094.1 glycosyltransferase -
  AOT11_RS15600 (AOT11_21820) - 3201927..3203120 (+) 1194 WP_017422095.1 glycosyltransferase -
  AOT11_RS15605 (AOT11_21825) - 3203117..3204295 (+) 1179 WP_017422096.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 55714.84 Da        Isoelectric Point: 6.7098

>NTDB_id=158048 AOT11_RS15590 WP_017422093.1 3199200..3200693(+) (luxO) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
MRAKVLLVEDSTSLAILYKQYVKDEPYDIFHVETGRDAIQFIERNTPQLVILDLKLPDMSGEDVLDWINQNDVPTAVIIA
TAHGSVDIAVSLMNKGAEDFLEKPIKADRLKTSIAVHLKRAKLEHLVENIQSRFDRPRYHGFIGACLPMQAVYKTIDSVA
PTSASVFINGESGTGKEVCAEAIHKQSLRKDKPFIAINCGAIPRDLMESEIFGHLKGAFTGATTDRKGAAMLANGGTLFL
DELCEMELEMQKKLLRFLQTGTFTPLGGSKEIKVDVRIICATNRDPLKEVEEGRFREDLYYRVHVVPIEMPPLRERGNDI
VELANHFLKTYAKEDGKKFNSISKEAQSILKKYNWPGNVRQLQNIIRNIVVLNDDNQLNMEHLPAQLTTKPQTVKEPAKL
SAPPQPVQAVIQEMRNGHEALNHHSLETQTSKANPLAHNAFHHSDGSIRPMWQIEREAIQNAIAFCDGNVISAAVMLELS
PSTVYRKKQAWEAEENA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=158048 AOT11_RS15590 WP_017422093.1 3199200..3200693(+) (luxO) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
ATGCGAGCAAAAGTACTGTTAGTCGAGGATTCCACTTCACTTGCCATTTTATATAAGCAATACGTCAAAGATGAACCCTA
TGACATTTTTCACGTGGAAACCGGACGTGACGCGATTCAGTTTATTGAGCGCAATACACCGCAACTGGTGATTTTAGATC
TCAAGTTGCCCGATATGTCCGGGGAAGATGTGCTTGACTGGATCAACCAAAACGATGTTCCGACCGCGGTTATCATTGCC
ACCGCTCATGGTTCCGTCGACATCGCCGTCAGCTTAATGAACAAAGGGGCGGAAGATTTTCTCGAAAAGCCAATCAAAGC
CGACCGTTTAAAAACATCCATTGCCGTTCATCTAAAACGCGCCAAATTAGAGCATTTAGTTGAGAACATACAGTCTCGCT
TCGACAGACCACGTTATCACGGCTTTATCGGCGCGTGCCTGCCAATGCAGGCCGTATATAAAACCATTGATTCAGTGGCG
CCAACCTCCGCCAGTGTTTTTATTAACGGAGAAAGTGGCACAGGGAAAGAAGTGTGTGCTGAAGCGATACACAAACAGAG
TCTGCGCAAAGACAAGCCCTTTATCGCAATCAACTGTGGGGCGATTCCTCGTGACTTAATGGAAAGCGAAATCTTTGGTC
ACTTAAAAGGGGCGTTTACCGGAGCGACAACCGATCGCAAAGGTGCAGCAATGCTGGCCAACGGCGGCACGCTATTTCTC
GATGAATTGTGCGAGATGGAACTGGAGATGCAGAAAAAACTGCTACGTTTTCTTCAGACCGGCACCTTCACCCCACTCGG
CGGCAGTAAAGAAATCAAAGTGGATGTACGCATCATCTGCGCCACCAATCGCGATCCCCTCAAAGAGGTCGAAGAAGGCC
GTTTTAGGGAAGATCTCTACTATCGTGTCCATGTGGTTCCAATTGAAATGCCACCACTGAGAGAACGCGGTAACGACATC
GTTGAGCTGGCCAATCACTTCCTCAAAACTTACGCCAAAGAGGACGGCAAAAAATTCAACTCAATCAGCAAAGAAGCGCA
ATCAATACTTAAAAAATACAACTGGCCGGGCAATGTCCGTCAGTTACAAAACATCATTCGTAACATTGTCGTTCTCAACG
ATGACAACCAACTGAATATGGAACATTTGCCGGCTCAACTCACCACCAAACCGCAAACTGTCAAAGAACCCGCTAAACTC
TCAGCACCACCTCAACCCGTTCAAGCGGTCATCCAAGAGATGCGCAACGGACATGAGGCGTTAAACCATCATTCGCTTGA
GACGCAAACATCCAAGGCCAATCCACTCGCTCACAATGCGTTCCACCATTCTGACGGCAGTATCCGTCCAATGTGGCAAA
TTGAACGCGAAGCGATTCAAAACGCCATCGCCTTTTGCGACGGCAACGTGATCAGTGCGGCGGTGATGTTGGAGCTAAGC
CCTTCGACGGTGTATCGCAAAAAACAAGCGTGGGAGGCAGAAGAAAATGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-114)

Bacterial regulatory protein, Fis family (HTH_8)

(451-487)

Sigma-54 interaction domain (Sigma54_activat)

(144-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

51.44

97.787

0.503
  pilR Acinetobacter baumannii strain A118

36.81

98.39

0.362

Multiple sequence alignment