Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   AOY20_RS05715 Genome accession   NZ_CP012808
Coordinates   1237573..1239795 (-) Length   740 a.a.
NCBI ID   WP_054580972.1    Uniprot ID   A0A0N7GXL8
Organism   Acinetobacter equi strain 114     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1232573..1244795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOY20_RS05690 (AOY20_05690) - 1232889..1233143 (-) 255 WP_054580967.1 YdcH family protein -
  AOY20_RS05695 (AOY20_05695) - 1233225..1233557 (-) 333 WP_054580968.1 chaperone modulator CbpM -
  AOY20_RS05700 (AOY20_05700) - 1233568..1234515 (-) 948 WP_054580969.1 DnaJ C-terminal domain-containing protein -
  AOY20_RS05705 (AOY20_05705) - 1234743..1235618 (-) 876 WP_054580970.1 Hsp33 family molecular chaperone HslO -
  AOY20_RS05710 (AOY20_05710) - 1235669..1237519 (-) 1851 WP_054580971.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  AOY20_RS05715 (AOY20_05715) priA 1237573..1239795 (-) 2223 WP_054580972.1 primosomal protein N' Machinery gene
  AOY20_RS05720 (AOY20_05720) gspF 1239949..1241154 (+) 1206 WP_054580973.1 type II secretion system inner membrane protein GspF -
  AOY20_RS05725 (AOY20_05725) gspG 1241180..1241611 (+) 432 WP_054582547.1 type II secretion system major pseudopilin GspG -
  AOY20_RS05730 (AOY20_05730) - 1241711..1242466 (+) 756 WP_054580974.1 hypothetical protein -
  AOY20_RS05735 (AOY20_05735) - 1242552..1243064 (+) 513 WP_054580975.1 hypothetical protein -
  AOY20_RS05740 (AOY20_05740) - 1243091..1243732 (+) 642 WP_054580976.1 fumarylacetoacetate hydrolase family protein -
  AOY20_RS05745 (AOY20_05745) msrA 1243781..1244302 (-) 522 WP_054580977.1 peptide-methionine (S)-S-oxide reductase MsrA -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84271.42 Da        Isoelectric Point: 8.9039

>NTDB_id=157760 AOY20_RS05715 WP_054580972.1 1237573..1239795(-) (priA) [Acinetobacter equi strain 114]
MPTTLETNSTNYRIRVAVPVHLYDTFDYLVTEEQYQHIHLGARVSVSFGRQNLVGIVVEKLPTNQPIQTKFKLKFITEIL
DEHAILDEKVLSLLTWSAQYYQFPIGEVIQSALPTLLRQGKPADLLTRVWILLDEHAETKIKRSDKQQEAYKILKLHPQG
TTENILNLAGIETATLKALAKKDICKCVHEKQDLSPMPMTLAQMPLTANEDQRKAIDTILKAQNKYQAFLLDGLTGSGKT
EVYLQVMERVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCNIVLLHSGLNDSKRLQAWQHAQSGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHAKDVALYRAHLEKCPIILGSATPSIDCYALVEQGKLKLLELNQRAGSALMPKMHV
LDLKVSPKQHGISQLLIGEIKRRIERKEQVLIFLNRRGYAPVLICDSCAWQAKCPNCDANFTLHYQPYSHLHCHHCGTIH
RKPDHCPQCNHEELKPIGMGTAKVEESLNELFPNVDVIRVDRDSTSRVGSWQKIYDRIQTSEPVILLGTQMLAKGHHFPY
VTLVTILDIDSGLLSVDFRAPERTAQLIVQVSGRAGRGEKKGDVYLQTLRPDHPLLSTLVNHDYRAFAHQTLKERKAALL
PPYRYTALIRCESKNQQLNQDFLQGYAQNLRTNANELIDIWGPIPAPMERKAGRYQAHMVLLSQDRAKLHFYIRQWWQNM
LHQKPSNMKLSLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=157760 AOY20_RS05715 WP_054580972.1 1237573..1239795(-) (priA) [Acinetobacter equi strain 114]
ATGCCAACAACTTTAGAAACAAACTCAACCAATTATCGTATTCGTGTTGCTGTGCCTGTACACCTTTACGACACTTTCGA
TTATTTGGTGACAGAAGAGCAGTATCAGCATATTCATCTTGGTGCTCGAGTTTCAGTTTCTTTTGGTCGCCAAAATCTAG
TTGGCATTGTTGTAGAAAAACTTCCAACCAATCAACCCATTCAAACAAAATTCAAACTAAAATTTATTACAGAAATTTTA
GATGAACATGCAATTTTAGATGAAAAAGTTTTAAGTTTATTGACATGGTCAGCACAATATTACCAATTTCCAATTGGAGA
AGTTATACAAAGTGCTTTACCTACGTTATTACGTCAAGGAAAGCCCGCTGATCTATTAACTCGAGTTTGGATCTTACTGG
ATGAGCATGCTGAAACAAAAATTAAACGCTCAGATAAACAACAAGAAGCTTATAAAATTCTAAAGCTTCATCCTCAAGGA
ACAACAGAAAATATTTTGAATTTAGCAGGTATTGAAACTGCAACATTAAAAGCTTTAGCCAAAAAAGACATTTGCAAATG
TGTGCATGAAAAACAAGATTTAAGCCCAATGCCAATGACTTTGGCACAAATGCCTCTCACAGCAAATGAAGATCAAAGAA
AGGCCATTGATACCATATTAAAAGCACAAAATAAGTACCAAGCATTTTTATTAGATGGATTGACGGGGAGTGGTAAAACT
GAAGTCTATTTACAAGTCATGGAACGAGTCCTAAAACAGGGAAAACAAGTTCTTGTTCTTGTGCCTGAAATTGGTTTAAC
TCCTCAAACAATTAGCCGTTTTCAATCTAGATTCCATTGTAATATTGTCTTGTTACATTCAGGTTTAAATGACTCAAAAC
GCTTACAAGCATGGCAACATGCTCAATCGGGAAAAGCATCTATTATTTTAGGGACGCGCTCAGCAATCTATACTCCCCTG
CCAAACCTAGGTTTAATTATTTTAGATGAAGAACATGATCTTTCTTTTAAACAACAAGAAGGTTTTCGTTATCATGCAAA
AGATGTCGCTTTATATCGTGCACATTTAGAAAAATGTCCAATTATTCTAGGCTCCGCAACACCAAGTATTGACTGCTATG
CGCTTGTAGAACAAGGCAAACTCAAATTATTAGAACTCAATCAGCGTGCAGGTTCAGCCCTTATGCCCAAAATGCATGTA
CTTGATTTAAAAGTGAGTCCAAAACAACATGGCATCAGCCAATTACTCATTGGTGAAATAAAAAGACGAATTGAACGCAA
AGAACAAGTTCTTATCTTTTTAAATCGACGTGGATATGCACCTGTACTTATCTGTGATAGCTGCGCATGGCAAGCAAAAT
GTCCAAATTGTGATGCCAATTTCACTCTACATTATCAGCCATATTCTCACTTACACTGCCATCATTGCGGTACGATTCAC
CGTAAGCCTGATCACTGCCCGCAATGTAATCACGAAGAACTCAAACCAATTGGTATGGGAACAGCAAAAGTTGAGGAAAG
CTTGAATGAATTATTTCCTAATGTTGACGTTATCCGTGTTGATCGAGATTCCACAAGTCGTGTTGGTAGCTGGCAAAAAA
TTTATGATCGTATTCAAACCAGCGAACCTGTAATTTTACTTGGTACACAAATGTTAGCCAAAGGACATCATTTTCCTTAT
GTCACACTTGTTACCATTTTAGATATAGATTCGGGCTTATTAAGTGTTGATTTTAGAGCCCCTGAACGAACGGCACAGCT
CATTGTTCAAGTTTCAGGTCGTGCAGGTCGTGGAGAGAAAAAAGGTGATGTGTATTTACAGACTTTACGTCCAGATCATC
CCCTATTAAGCACTTTGGTAAATCATGACTATCGTGCTTTTGCTCATCAGACTTTAAAAGAACGTAAAGCGGCATTATTA
CCACCTTATCGTTATACAGCACTCATTCGATGTGAATCTAAAAATCAACAATTGAATCAAGACTTTTTACAAGGATATGC
TCAAAACCTAAGAACAAATGCAAATGAGCTTATTGATATTTGGGGACCTATTCCTGCACCAATGGAACGTAAAGCTGGAC
GTTATCAAGCACATATGGTTTTGTTATCACAAGATCGAGCTAAATTACATTTTTACATCCGACAATGGTGGCAAAATATG
TTGCATCAAAAGCCATCAAATATGAAACTAAGCTTAGATATAGATCCTCAGGAATTGAGCTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(209-369)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0N7GXL8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.968

100

0.722

Multiple sequence alignment