Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   SanJ4211_RS01790 Genome accession   NZ_CP012805
Coordinates   334013..335059 (+) Length   348 a.a.
NCBI ID   WP_057489573.1    Uniprot ID   A0AAP6ENR0
Organism   Streptococcus anginosus strain J4211     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 329013..340059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS01760 (SanJ4211_0320) tsaE 330386..330826 (+) 441 WP_057489569.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SanJ4211_RS01765 (SanJ4211_0321) - 330819..331340 (+) 522 WP_057489570.1 GNAT family N-acetyltransferase -
  SanJ4211_RS01770 (SanJ4211_0322) brpA 331347..332462 (+) 1116 WP_057489571.1 biofilm formation/cell division transcriptional regulator BrpA -
  SanJ4211_RS01775 (SanJ4211_0323c) - 332509..332796 (-) 288 WP_057489572.1 hypothetical protein -
  SanJ4211_RS01780 (SanJ4211_0324c) - 332806..333216 (-) 411 WP_003025977.1 HIT family protein -
  SanJ4211_RS01785 (SanJ4211_0325) pptA 333285..334016 (+) 732 WP_049517074.1 ABC transporter ATP-binding protein Regulator
  SanJ4211_RS01790 (SanJ4211_0326) pptB 334013..335059 (+) 1047 WP_057489573.1 ABC transporter permease Regulator
  SanJ4211_RS01795 (SanJ4211_0327) ccrZ 335110..335907 (+) 798 WP_003025972.1 cell cycle regulator CcrZ -
  SanJ4211_RS01800 (SanJ4211_0328) trmB 335904..336539 (+) 636 WP_021001286.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SanJ4211_RS01805 (SanJ4211_0329) - 337156..337845 (+) 690 WP_003025968.1 VIT1/CCC1 transporter family protein -
  SanJ4211_RS01810 (SanJ4211_0330) rimP 338093..338581 (+) 489 WP_003025965.1 ribosome maturation factor RimP -
  SanJ4211_RS01815 (SanJ4211_0331) nusA 338630..339823 (+) 1194 WP_003025963.1 transcription termination factor NusA -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40917.19 Da        Isoelectric Point: 10.3649

>NTDB_id=157682 SanJ4211_RS01790 WP_057489573.1 334013..335059(+) (pptB) [Streptococcus anginosus strain J4211]
MRELFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFTGFLAVQYSQLLRNLPSNHLPIILALAVLLFLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWALLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNIYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYNAFDYQYLTFLFPLETGLKLKGVKQVIILIGYSVLFVETIMALLFFQD
RVALLFMIGITLLLYFIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=157682 SanJ4211_RS01790 WP_057489573.1 334013..335059(+) (pptB) [Streptococcus anginosus strain J4211]
ATGAGAGAACTGTTTCAAAAGCGCAAACAAGTATTTCGCAATCAATGTTTGAAGTATTCGCGCTATGTTTTTAACGACCA
TTTTGTCCTCTTTTTATTAGTTTTTACTGGCTTTTTAGCTGTTCAATACAGTCAGTTGTTGCGAAATTTACCTTCAAATC
ACCTGCCAATCATTCTTGCTTTAGCAGTTCTTTTGTTCTTATTATTGCCTTTGGGACGAATCGCGACTTATATGGAAAAA
CCAGATAGTTTATTTTTGTTAGTCAAAGAGGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGATT
ATGGGCCTTGCTTCAAACCGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGCTATCTCATTGCTTATGAAGAAAGACGTAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACCAATGT
CAAAGGAATTTCTAATAGTGTGAAACGCCGTGCGTATCTTGATGGTTTGACAAATATTCTACCAAAAAGACAGTCAACTA
CTTGGCAAAATATATATTTGCGTTCTTATTTACGAAATGGTGATTTTCTGGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGTTTTATCAGTCAATCATGGATTGCGGCTATTTTCGTGGCTTTGTTGAATTATCTCTTGCTATTTCA
GTTGACAGCCTTGTACAATGCTTTTGATTATCAATATTTGACGTTCTTATTTCCTTTGGAAACTGGATTGAAATTAAAAG
GAGTGAAACAAGTGATTATTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATAATGGCTTTGTTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATTGGAATTACATTGCTACTTTATTTCATCTATTTACCATTTAAATTAAGAAGTTTGGT
TGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.276

100

0.483

  pptB Streptococcus salivarius strain HSISS4

46.839

100

0.468


Multiple sequence alignment