Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   ACH32_RS13205 Genome accession   NZ_CP012756
Coordinates   2615829..2616701 (+) Length   290 a.a.
NCBI ID   WP_000620185.1    Uniprot ID   A0A0U1MIZ2
Organism   Staphylococcus aureus strain JS395     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2610829..2621701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH32_RS13185 (ACH32_13175) sucC 2610944..2612110 (+) 1167 WP_001020801.1 ADP-forming succinate--CoA ligase subunit beta -
  ACH32_RS13190 (ACH32_13180) sucD 2612132..2613040 (+) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  ACH32_RS13195 (ACH32_13185) - 2613267..2614385 (+) 1119 WP_060649859.1 LysM peptidoglycan-binding domain-containing protein -
  ACH32_RS13200 (ACH32_13190) fmhC 2614413..2615657 (+) 1245 WP_060649860.1 FemA/FemB family glycyltransferase FmhC -
  ACH32_RS13205 (ACH32_13195) dprA 2615829..2616701 (+) 873 WP_000620185.1 DNA-processing protein DprA Machinery gene
  ACH32_RS13210 (ACH32_13200) topA 2616875..2618950 (+) 2076 WP_001622395.1 type I DNA topoisomerase -
  ACH32_RS13215 (ACH32_13205) trmFO 2619106..2620413 (+) 1308 WP_000195251.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33533.98 Da        Isoelectric Point: 9.6905

>NTDB_id=157631 ACH32_RS13205 WP_000620185.1 2615829..2616701(+) (dprA) [Staphylococcus aureus strain JS395]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLNHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=157631 ACH32_RS13205 WP_000620185.1 2615829..2616701(+) (dprA) [Staphylococcus aureus strain JS395]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTAATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGAAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACGCATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGAGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U1MIZ2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.621

100

0.986
  dprA Staphylococcus aureus N315

98.276

100

0.983

Multiple sequence alignment