Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   ACH32_RS06580 Genome accession   NZ_CP012756
Coordinates   1245118..1246005 (-) Length   295 a.a.
NCBI ID   WP_060649710.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JS395     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1240118..1251005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH32_RS06545 (ACH32_06540) - 1240125..1240213 (+) 89 Protein_1247 hypothetical protein -
  ACH32_RS06550 (ACH32_06545) - 1240321..1240818 (-) 498 WP_001065267.1 glutathione peroxidase -
  ACH32_RS06555 (ACH32_06550) - 1240828..1241088 (-) 261 WP_072468805.1 hypothetical protein -
  ACH32_RS06560 (ACH32_06555) - 1241470..1241583 (-) 114 WP_072468803.1 hypothetical protein -
  ACH32_RS06570 (ACH32_06565) - 1242258..1244258 (-) 2001 WP_000776736.1 ABC transporter permease -
  ACH32_RS06575 (ACH32_06570) - 1244255..1245010 (-) 756 WP_000923765.1 ABC transporter ATP-binding protein -
  ACH32_RS06580 (ACH32_06575) braS 1245118..1246005 (-) 888 WP_060649710.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  ACH32_RS06585 (ACH32_06580) braR 1246016..1246681 (-) 666 WP_000697881.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  ACH32_RS06590 (ACH32_06585) - 1246707..1246907 (-) 201 WP_000604722.1 hypothetical protein -
  ACH32_RS06600 (ACH32_06595) - 1247105..1248528 (+) 1424 Protein_1256 alkaline phosphatase -
  ACH32_RS15720 - 1248588..1248689 (-) 102 WP_000731972.1 SE2200 family small protein -
  ACH32_RS06605 (ACH32_06600) - 1248811..1249266 (-) 456 WP_060649711.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACH32_RS06610 (ACH32_06605) - 1249511..1250272 (-) 762 WP_000323454.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34047.25 Da        Isoelectric Point: 5.6141

>NTDB_id=157615 ACH32_RS06580 WP_060649710.1 1245118..1246005(-) (braS) [Staphylococcus aureus strain JS395]
MTFLKSITQEIAIVIVIFALFGSMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKDDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSTGIGLFIVKQISNHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=157615 ACH32_RS06580 WP_060649710.1 1245118..1246005(-) (braS) [Staphylococcus aureus strain JS395]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTCAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAGATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCGAATGTTGTGAATCGTGTTCGTCAAGAGGTAATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATAAACAATATTATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGAATCGGTATTAGTGAGGCAGACTTACCTAAA
ATATTCGACAAAGGTTATTCGGGGTATAATGGACAACGTCAAAGTAATTCAACTGGGATTGGCTTATTTATTGTAAAGCA
AATTTCAAATCACACTAATCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

97.966

100

0.98


Multiple sequence alignment