Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | FORC17_RS02830 | Genome accession | NZ_CP012739 |
| Coordinates | 578683..579300 (-) | Length | 205 a.a. |
| NCBI ID | WP_011079558.1 | Uniprot ID | Q7MHU7 |
| Organism | Vibrio vulnificus strain FORC_017 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 573683..584300
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC17_RS02820 (FORC17_0493) | aceF | 574953..576866 (+) | 1914 | WP_065090100.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| FORC17_RS02825 (FORC17_0494) | lpdA | 577124..578551 (+) | 1428 | WP_011079557.1 | dihydrolipoyl dehydrogenase | - |
| FORC17_RS02830 (FORC17_0495) | opaR | 578683..579300 (-) | 618 | WP_011079558.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| FORC17_RS02835 (FORC17_0496) | hpt | 579692..580222 (+) | 531 | WP_011079559.1 | hypoxanthine phosphoribosyltransferase | - |
| FORC17_RS02840 (FORC17_0497) | can | 580321..580989 (-) | 669 | WP_011079560.1 | carbonate dehydratase | - |
| FORC17_RS02845 (FORC17_0498) | - | 581231..582901 (+) | 1671 | WP_026130631.1 | SulP family inorganic anion transporter | - |
| FORC17_RS02850 (FORC17_0499) | - | 583067..583990 (+) | 924 | WP_065090101.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23717.02 Da Isoelectric Point: 6.1461
>NTDB_id=157438 FORC17_RS02830 WP_011079558.1 578683..579300(-) (opaR) [Vibrio vulnificus strain FORC_017]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
Nucleotide
Download Length: 618 bp
>NTDB_id=157438 FORC17_RS02830 WP_011079558.1 578683..579300(-) (opaR) [Vibrio vulnificus strain FORC_017]
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGTGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAACCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCAATGATTGAGCTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCGACGCGTGATGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAATTACTGGTACAAAACATGTTCATCAAAGCCATTGAGCGTGGTGAAGTGTGTGACCAACACAACCCAGAA
GATTTGGCGAACTTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGTACCAACAATACCGCAGAGCTCAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAGCACGAATAA
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGTGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAACCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCAATGATTGAGCTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCGACGCGTGATGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAATTACTGGTACAAAACATGTTCATCAAAGCCATTGAGCGTGGTGAAGTGTGTGACCAACACAACCCAGAA
GATTTGGCGAACTTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGTACCAACAATACCGCAGAGCTCAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAGCACGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
92.157 |
99.512 |
0.917 |
| hapR | Vibrio cholerae C6706 |
72.864 |
97.073 |
0.707 |
| hapR | Vibrio cholerae strain A1552 |
72.864 |
97.073 |
0.707 |