Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   SanJ4206_RS02895 Genome accession   NZ_CP012719
Coordinates   578779..580581 (+) Length   600 a.a.
NCBI ID   WP_003028156.1    Uniprot ID   -
Organism   Streptococcus anginosus strain J4206     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 573779..585581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS02875 (SanJ4206_0535) - 574064..574771 (+) 708 WP_003028166.1 glucosamine-6-phosphate deaminase -
  SanJ4206_RS02880 (SanJ4206_0536) - 574887..576263 (+) 1377 WP_022525369.1 DUF1958 domain-containing protein -
  SanJ4206_RS02885 (SanJ4206_0537) - 576342..577511 (+) 1170 WP_106382586.1 MFS transporter -
  SanJ4206_RS02890 (SanJ4206_0538) coiA 577796..578827 (+) 1032 WP_003028159.1 competence protein CoiA Machinery gene
  SanJ4206_RS02895 pepF 578779..580581 (+) 1803 WP_003028156.1 oligoendopeptidase F Regulator
  SanJ4206_RS02900 (SanJ4206_0539) - 580583..581266 (+) 684 WP_003028154.1 O-methyltransferase -
  SanJ4206_RS02905 (SanJ4206_0540) prsA 581373..582311 (+) 939 WP_003028152.1 peptidylprolyl isomerase PrsA -
  SanJ4206_RS02910 (SanJ4206_0541) - 582536..583018 (+) 483 WP_003028148.1 LURP-one-related/scramblase family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69218.13 Da        Isoelectric Point: 4.5201

>NTDB_id=156772 SanJ4206_RS02895 WP_003028156.1 578779..580581(+) (pepF) [Streptococcus anginosus strain J4206]
MAKQRNEIEEKYTWDLTTIFPTDEAFEAELSQVSKELKEASSLAGHLLDSADSLLKTTEIQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQAFAFYEPEFMAITDEQYQTFLAEKPELQIYQHFFDKLLQKKPHILSQREEELLAGA
GEIFSAAGDTFGILDNADIVFPTVHDEEGNEVQLTHGNYISLVESKNRTVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRNFSSAREAALSANFIPESVYDSLVSAVNKHLPLLHRYIALRAKILGLSDLKMYDLYTPLSEADYKFTYEEALT
KAEEVLAILGEDYLSRVKEAFSDRWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTREN
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDQTRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNDLYADLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALADKIVNGTQEDKEKYLNYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=156772 SanJ4206_RS02895 WP_003028156.1 578779..580581(+) (pepF) [Streptococcus anginosus strain J4206]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGACCTAACAACGATTTTCCCAACAGATGAAGCTTTTGA
GGCAGAGTTAAGTCAAGTTTCAAAAGAATTAAAAGAAGCCAGCAGCTTAGCAGGTCATCTTTTGGATTCGGCTGATAGCC
TTTTAAAAACAACAGAAATCCAATTGGACTTAATGCGTCGCATAGAAAAGCTCTATTCCTATGCTCACATGAAAAATGAC
CAAGATACGCGCGTGGCAAAATACCAAGAATACCAAGCCAAGGGTATGGCTATTTATAGTGAATTCGGACAGGCATTTGC
TTTCTATGAACCAGAATTTATGGCAATCACAGACGAGCAATATCAGACTTTCTTAGCTGAAAAGCCTGAATTGCAAATCT
ATCAGCACTTCTTTGATAAACTACTGCAAAAGAAACCTCATATCCTTTCTCAGCGTGAGGAAGAATTGTTGGCAGGTGCT
GGTGAAATCTTCAGTGCTGCGGGTGATACTTTTGGAATCTTGGACAATGCCGATATTGTCTTTCCAACCGTACACGACGA
AGAAGGAAATGAAGTGCAATTGACGCACGGAAATTACATCAGTCTAGTGGAGTCGAAAAATCGTACAGTCCGCAAGGAAG
CTTATGAAGCGCTTTACAGCGTCTATGAGCAATACCAACACACTTATGCTAAGACACTCCAAACGAATGTTAAAGTTCAT
AATTACAATGCCAAAGTTCGTAATTTTTCTTCTGCGCGTGAAGCTGCCTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGATAGCTTAGTGTCTGCGGTCAACAAACATTTGCCACTCTTACATCGCTATATTGCGCTACGTGCAAAGATTTTAGGTC
TTTCTGATTTGAAAATGTACGACCTCTATACACCATTGTCAGAAGCAGATTACAAATTTACTTATGAGGAAGCCTTGACG
AAAGCAGAAGAAGTCTTAGCTATCCTTGGAGAAGATTATCTAAGTCGAGTAAAAGAAGCCTTTTCAGATCGTTGGATTGA
TGTTTATGAAAACCAAGGCAAGCGCTCTGGGGCTTATTCTGGTGGTTCTTACGATACCAATGCTTTTATGTTGCTCAACT
GGCAAGATACGTTGGACAATCTTTTTACGCTGGTTCATGAAACTGGTCACAGCATGCATTCCAGCTACACTCGTGAAAAT
CAGCCGTACGTTTACGGAGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACGACCAACGAAAATATCCTTACGGAGAA
ATTATTGGAAGAAGTAGATGACGATCAAACCCGCTTTGCGATTCTGAATCATTTCTTGGACGGTTTCCGTGGAACTGTTT
TCCGCCAAACTCAATTTGCCGAGTTTGAACATGCCATTCACAAAGCTGACCAAGAAGGTCAAGTCTTGACGAGTGAATTT
TTGAATGATTTGTACGCAGATTTGAATGAAAAATATTATGGTTTGACGAAAGAGGACAACCCACAAATTCAATACGAATG
GGCACGGATTCCGCATTTCTACTATGATTACTATGTTTTCCAATACTCAACCGGTTTCTCAGCTGCTTCTGCCTTAGCTG
ATAAGATTGTTAACGGAACGCAAGAAGATAAAGAGAAGTATCTCAACTACTTGAAAGCAGGAAATTCTGATTATCCGCTA
AATGTCATTAAAAAAGCTGGTGTAGATATGGAAAAAGAAGACTATCTCAATGCTGCCTTTGCAGTCTTTGAGCGTCGTCT
TGATGAATTTGAAGCACTCGTAGAAAAGTTAGGATTGGCATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

69.128

99.333

0.687

Multiple sequence alignment