Detailed information NTG0156603

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AN159_RS07155
• Genome accession: NZ_CP012694
• Coordinates: 1356418..1357278 (+)
• Length: 286 a.a.
• NCBI ID: WP_069972466.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain 331401
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1351418..1362278

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AN159_RS07140 (AN159_07190)	dapD	1352124..1352945 (-)	822	WP_002216408.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	-
AN159_RS07145 (AN159_07195)	pgi	1353112..1354755 (-)	1644	WP_069972464.1	glucose-6-phosphate isomerase	-
AN159_RS07150 (AN159_07200)	pilG	1355112..1356344 (+)	1233	WP_069972465.1	type 4 pilus assembly protein PilG	Machinery gene
AN159_RS07155 (AN159_07205)	pilD	1356418..1357278 (+)	861	WP_069972466.1	prepilin peptidase	Machinery gene
AN159_RS07160 (AN159_07210)	coaE	1357280..1357912 (+)	633	WP_050895769.1	dephospho-CoA kinase	-
AN159_RS07165 (AN159_07215)	-	1357905..1358114 (+)	210	WP_002212333.1	DNA gyrase inhibitor YacG	-
AN159_RS07170 (AN159_07220)	pilF	1358199..1359875 (-)	1677	WP_002245855.1	type IV-A pilus assembly ATPase PilB	Machinery gene
AN159_RS07180 (AN159_07230)	-	1360317..1360763 (-)	447	WP_002233503.1	DUF441 domain-containing protein	-
AN159_RS07185 (AN159_07235)	ispB	1360768..1361742 (-)	975	WP_002216396.1	octaprenyl diphosphate synthase	-
AN159_RS07190 (AN159_07240)	rplU	1361966..1362274 (+)	309	WP_002216394.1	50S ribosomal protein L21	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 31317.32 Da
• Isoelectric Point: 8.2213

>NTDB_id=156603 AN159_RS07155 WP_069972466.1 1356418..1357278(+) (pilD) [Neisseria meningitidis strain 331401]
MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVFAKEYLNLPLTEEESRTFNLMKPDSCCPKCRVPIRAW
QNIPIVSYLLLRGKCASCQTKISIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAALGAWLGISALPVLIFVSSLIGLV
AAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRAGNWWLTHPVL

Nucleotide

• Length: 861 bp

>NTDB_id=156603 AN159_RS07155 WP_069972466.1 1356418..1357278(+) (pilD) [Neisseria meningitidis strain 331401]
ATGTCTGATTTGTCTGTATTGTCGCCGTTTGCCGTGCCTTTGGCAGCGGTGTTCGGGCTGCTGGTCGGAAGTTTCTTAAA
TGTCGTCATTTACCGCGTGCCGGTCATGATGGAACGCGGCTGGACGGTATTTGCCAAAGAATATTTAAACCTGCCGCTGA
CCGAAGAGGAAAGCCGTACCTTCAACCTGATGAAACCGGATTCCTGCTGTCCCAAATGTCGCGTGCCGATACGCGCGTGG
CAGAACATCCCGATTGTCAGCTACCTGCTCCTGCGCGGCAAATGCGCTTCCTGCCAAACCAAAATCAGCATACGTTATCC
CTTAATCGAGCTGCTGACCGGCGTATTGTTCGGGCTGGTTGCCTGGCAATACGGCTGGTCTTGGATTACATTGGGCGGTT
TGATACTGACCGCGTTTCTGATTTCCCTGACCTTTATCGATGCGGACACCCAATACCTGCCCGACTCGATGACCTTACCC
TTGATTTGGCTGGGGCTGATATTTAATTTGGACGGCGGCTTCGTGCCTTTGCAGTCTGCCGTTTTAGGTGCGGTTGCCGG
CTATGGTTCGATATGGCTTTTATGCGCGGTATATAAACTGATTAAAGGCGAAATCGGTATGGGCAACGGAGATTTCAAAC
TGATTGCCGCATTGGGCGCGTGGCTCGGCATATCCGCATTGCCCGTGCTGATTTTTGTTTCCTCGCTGATCGGTTTGGTC
GCGGCAATCGTTATGCGCGTCGCCAAGGGGCAGCATTTTGCCTTCGGCCCCGCACTGACAGTTTCGGGCTGGATAATTTT
TACGGCAAACGATTCCGTATGGCGGGCGGGCAACTGGTGGCTGACCCATCCGGTGCTGTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (17-124)

• Type IV leader peptidase family (Peptidase_A24) (134-242)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Neisseria gonorrhoeae MS11	95.789	99.65	0.955
pilD	Vibrio cholerae strain A1552	44.599	100	0.448
pilD	Vibrio campbellii strain DS40M4	44.928	96.503	0.434
pilD	Acinetobacter baumannii D1279779	46.97	92.308	0.434
pilD	Acinetobacter nosocomialis M2	46.97	92.308	0.434