Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CjjRM3196_RS05525 | Genome accession | NZ_CP012690 |
| Coordinates | 1053539..1053841 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain RM3196 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1048539..1058841
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CjjRM3196_RS05500 (CjjRM3196_1090) | rpsR | 1048902..1049162 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CjjRM3196_RS05505 (CjjRM3196_1091) | lon | 1049222..1051597 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| CjjRM3196_RS05510 (CjjRM3196_1092) | - | 1051614..1052261 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| CjjRM3196_RS05515 (CjjRM3196_1093) | fliW | 1052422..1052811 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CjjRM3196_RS05520 (CjjRM3196_1094) | proC | 1052811..1053542 (+) | 732 | WP_002854026.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CjjRM3196_RS05525 (CjjRM3196_1095) | ctsT | 1053539..1053841 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CjjRM3196_RS05530 (CjjRM3196_1096) | - | 1053838..1054500 (+) | 663 | WP_002853997.1 | hypothetical protein | - |
| CjjRM3196_RS05535 (CjjRM3196_1097) | - | 1054497..1054949 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CjjRM3196_RS05540 (CjjRM3196_1098) | hemD | 1054946..1055575 (-) | 630 | WP_002853476.1 | uroporphyrinogen-III synthase | - |
| CjjRM3196_RS05545 (CjjRM3196_1099) | thiE | 1055553..1056185 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| CjjRM3196_RS05550 (CjjRM3196_1100) | thiD | 1056175..1056987 (-) | 813 | WP_002853647.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CjjRM3196_RS05555 (CjjRM3196_1101) | - | 1056984..1057670 (-) | 687 | WP_002853783.1 | endonuclease III domain-containing protein | - |
| CjjRM3196_RS05560 (CjjRM3196_1102) | - | 1057667..1058427 (-) | 761 | Protein_1061 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=156446 CjjRM3196_RS05525 WP_002853046.1 1053539..1053841(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain RM3196]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=156446 CjjRM3196_RS05525 WP_002853046.1 1053539..1053841(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain RM3196]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |